RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 NGFP01138 241 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 ANXA2P07355 339 aaKnown RBP7.84□□□□□ -1.15
NUP54-207ENST00000508583 ADRA2AP08913 450 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 MRPL3P09001 348 aaKnown RBP7.84□□□□□ -1.15
NUP54-207ENST00000508583 DBHP09172 617 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 SBK2P0C263 348 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 OR2T7P0C7T2 308 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 ALOX5APP20292 161 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 TNFSF4P23510 183 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 DCTDP32321 178 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 CDKN1AP38936 164 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 OPRL1P41146 370 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 RPS27P42677 84 aaKnown RBP7.84□□□□□ -1.15
NUP54-207ENST00000508583 HSPA13P48723 471 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 CX3CR1P49238 355 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 RIDAP52758 137 aaKnown RBP7.84□□□□□ -1.15
NUP54-207ENST00000508583 ROM1Q03395 351 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 EGR3Q06889 387 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 RIPK1Q13546 671 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 ZNF829Q3KNS6 432 aaPredicted RBP7.84□□□□□ -1.15
NUP54-207ENST00000508583 SPATA46Q5T0L3 261 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 LPCAT4Q643R3 524 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 FBXW12Q6X9E4 464 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 PGAP1Q75T13 922 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 MRPL21Q7Z2W9 205 aaKnown RBP7.84□□□□□ -1.15
NUP54-207ENST00000508583 ZNF679Q8IYX0 411 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 FTMTQ8N4E7 242 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 OR51G2Q8NGK0 314 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 OR2T27Q8NH04 317 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 SLC7A6Q92536 515 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 EGLN1Q9GZT9 426 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 OR10A2Q9H208 303 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 MOB1AQ9H8S9 216 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 ADGRL4Q9HBW9 690 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 DNAJC27Q9NZQ0 273 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 ZDHHC8Q9ULC8 765 aa7.84□□□□□ -1.15
NUP54-207ENST00000508583 RPL36Q9Y3U8 105 aaKnown RBP7.84□□□□□ -1.15
NUP54-207ENST00000508583 PRRC2AP48634 2157 aaKnown RBP7.83□□□□□ -1.16
NUP54-207ENST00000508583 TMEM129A0AVI4 362 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 C17orf100A8MU93 164 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 NDUFS8O00217 210 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 FADS2O95864 444 aaKnown RBP7.83□□□□□ -1.16
NUP54-207ENST00000508583 IGHV4-39P01824 125 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 KRT8P05787 483 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 KITLGP21583 273 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 DDOSTP39656 456 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 CAPGP40121 348 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 ALDH3B1P43353 468 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 ZNF81P51508 661 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 PRKXP51817 358 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 PSMA6P60900 246 aaKnown RBP7.83□□□□□ -1.16
NUP54-207ENST00000508583 ERVS71-1P61550 626 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 MRPS11P82912 194 aaKnown RBP7.83□□□□□ -1.16
NUP54-207ENST00000508583 IL5RAQ01344 420 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 MZT1Q08AG7 82 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 TIGD6Q17RP2 521 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 ZNF691Q5VV52 312 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 ZNF322Q6U7Q0 402 aaPredicted RBP7.83□□□□□ -1.16
NUP54-207ENST00000508583 FAM220AQ7Z4H9 259 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 KCTD20Q7Z5Y7 419 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 EGFL6Q8IUX8 553 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 SLC35F2Q8IXU6 374 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 ENTHD1Q8IYW4 607 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 C8orf59Q8N0T1 100 aaPredicted RBP7.83□□□□□ -1.16
NUP54-207ENST00000508583 ZNF540Q8NDQ6 660 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 OR10S1Q8NGN2 331 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 RHOXF1Q8NHV9 184 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 HAVCR2Q8TDQ0 301 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 SPRYD4Q8WW59 207 aaPredicted RBP7.83□□□□□ -1.16
NUP54-207ENST00000508583 HAVCR1Q96D42 359 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 ADI1Q9BV57 179 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 SLC22A4Q9H015 551 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 DECR2Q9NUI1 292 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 NKIRAS2Q9NYR9 191 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 PURGQ9UJV8 347 aaKnown RBP7.83□□□□□ -1.16
NUP54-207ENST00000508583 IKZF2Q9UKS7 526 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 FZR1Q9UM11 496 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 STARD10Q9Y365 291 aa7.83□□□□□ -1.16
NUP54-207ENST00000508583 LOC390937A0A1W2PQ73 354 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 TPD52L2O43399 206 aaKnown RBP7.82□□□□□ -1.16
NUP54-207ENST00000508583 RRP9O43818 475 aaKnown RBP7.82□□□□□ -1.16
NUP54-207ENST00000508583 ENTPD6O75354 484 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 SULT1C4O75897 302 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 CLPTM1O96005 669 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 ADH4P08319 380 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 RPSAP08865 295 aaKnown RBP7.82□□□□□ -1.16
NUP54-207ENST00000508583 TACSTD2P09758 323 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 MPV17P39210 176 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 PDLIM4P50479 330 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 ZNF121P58317 390 aaPredicted RBP7.82□□□□□ -1.16
NUP54-207ENST00000508583 CXCR4P61073 352 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 ACTA2P62736 377 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 ACTG2P63267 376 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 DBPQ10586 325 aaPredicted RBP7.82□□□□□ -1.16
NUP54-207ENST00000508583 RAB40BQ12829 278 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 PSG7Q13046 419 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 MED21Q13503 144 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 TESK1Q15569 626 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 CLEC12BQ2HXU8 276 aa7.82□□□□□ -1.16
NUP54-207ENST00000508583 RSPO1Q2MKA7 263 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms