RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 OR9Q2Q8NGE9 314 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 OR52E2Q8NGJ4 325 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 OR10S1Q8NGN2 331 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 MAP6Q96JE9 813 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 CDRT15Q96T59 188 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 DDOQ99489 341 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 BTBD10Q9BSF8 475 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 MRI1Q9BV20 369 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 SSBP3Q9BWW4 388 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 HCAR1Q9BXC0 346 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 EGLN3Q9H6Z9 239 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 OR5V1Q9UGF6 321 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 TAGLN3Q9UI15 199 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 TMCC3Q9ULS5 477 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 LYVE1Q9Y5Y7 322 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 CDH10Q9Y6N8 788 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 BHLHE40O14503 412 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 ATP8B1O43520 1251 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 HLA-DQA2P01906 255 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 PSKH1P11801 424 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 CPT2P23786 658 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 CD80P33681 288 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 PMELP40967 661 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 CD200P41217 278 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 PAX8Q06710 450 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 MAB21L1Q13394 359 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 ZNF404Q494X3 552 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 CLEC12AQ5QGZ9 265 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 FAM201AQ5SY85 155 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 SLC35F1Q5T1Q4 408 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 DOK3Q7L591 496 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 CPLX4Q7Z7G2 160 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 KLBQ86Z14 1044 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 ZDHHC21Q8IVQ6 265 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 BCL6BQ8N143 479 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 C3orf56Q8N813 242 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 OR2AJ1Q8NGZ0 328 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 Q8TCH9 128 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 GNPDA2Q8TDQ7 276 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 ZNRF4Q8WWF5 429 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 ZMYND19Q96E35 227 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 C1orf147Q96MC9 270 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 ZNF48Q96MX3 618 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 TMEM246Q9BRR3 403 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 DDX28Q9NUL7 540 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 TMEM100Q9NV29 134 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 KCNG2Q9UJ96 466 aa10.88□□□□□ -0.67
HMGCS1-205ENST00000508319 IGHV2-70DA0A0C4DH43 119 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 DNAJC9-AS1A6NH13 148 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 LRRC30A6NM36 301 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 M0R135 149 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 KRT36O76013 467 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 LCATP04180 440 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 IGHV4-38-2P0DP08 117 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 ATP6V1B2P21281 511 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 OTX1P32242 354 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 PYCR1P32322 319 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 MAGEA2P43356 314 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 HMGA2P52926 109 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 RAD23AP54725 363 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 MALLQ13021 153 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 SNAI3Q3KNW1 292 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 SPATS1Q496A3 300 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 ZNF770Q6IQ21 691 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 RPL13AP3Q6NVV1 102 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 LYPD4Q6UWN0 246 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 PGAP1Q75T13 922 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 DEFB107AQ8IZN7 70 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 C1orf87Q8N0U7 546 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 CELF2-AS1Q8N7Q2 184 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 CYB561A3Q8NBI2 242 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 OR52L1Q8NGH7 329 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 OR4C15Q8NGM1 316 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 OR8D4Q8NGM9 314 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 SLCO4A1Q96BD0 722 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 ZNF799Q96GE5 643 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 CDADC1Q9BWV3 514 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 IL20Q9NYY1 176 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 MIOXQ9UGB7 285 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 COMMD3-BMI1R4GMX3 469 aa10.87□□□□□ -0.67
HMGCS1-205ENST00000508319 C5orf63A6NC05 138 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 TVP23AA6NH52 213 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 FAM20BO75063 409 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 PPIAL4GP0DN37 164 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 EGR1P18146 543 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 PRTN3P24158 256 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 PITPNBP48739 271 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 TPTEP56180 551 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 GNB2P62879 340 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 HOXA4Q00056 320 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 ZNF92Q03936 586 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 MPPED2Q15777 294 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 ZNF362Q5T0B9 420 aaPredicted RBP10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 PRAMEF6Q5VXH4 476 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 C16orf89Q6UX73 402 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 CYP2R1Q6VVX0 501 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 RBMS3Q6XE24 437 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 PARP8Q8N3A8 854 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 PROKR2Q8NFJ6 384 aa10.86□□□□□ -0.67
HMGCS1-205ENST00000508319 OR2AE1Q8NHA4 323 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms