RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ZNF782Q6ZMW2 699 aaPredicted RBP6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 Q6ZNX1 250 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 TMEM151AQ8N4L1 468 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 OR4K15Q8NH41 348 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 OR14A16Q8NHC5 309 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 DYRK2Q92630 601 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 OR5B12Q96R08 314 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 NPFFR1Q9GZQ6 430 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 RAB6CQ9H0N0 254 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 FBXO6Q9NRD1 293 aaPredicted RBP6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 TMEM181Q9P2C4 612 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 RALYQ9UKM9 306 aaKnown RBP6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 KCNIP3Q9Y2W7 256 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 MYH7P12883 1935 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 ABCA3Q99758 1704 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 SHANK3Q9BYB0 1731 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 COL5A2P05997 1499 aaPredicted RBP6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 CLDN24A6NM45 220 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 DHRS7CA6NNS2 312 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 PPP5D1E7EU14 171 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 CLIC1O00299 241 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 MSTNO14793 375 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 PDE6DO43924 150 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 CDC40O60508 579 aaKnown RBP eCLIP6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 HAND1O96004 215 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 IFNA1P01562 189 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 C4BPBP20851 252 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 ATP5A1P25705 553 aaKnown RBP6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 HOXD3P31249 432 aaPredicted RBP6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 ARL4AP40617 200 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 EFNA3P52797 238 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 GTF2BQ00403 316 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 ZNF235Q14590 738 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 GUSBP1Q15486 140 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 TEAD2Q15562 447 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 C3AR1Q16581 482 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 LRRC75BQ2VPJ9 315 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 TMEM205Q6UW68 189 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 CBLL1Q75N03 491 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 ATG4DQ86TL0 474 aaPredicted RBP6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 OR2L13Q8N349 312 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 ZNF676Q8N7Q3 588 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 WDR31Q8NA23 367 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 OR9Q1Q8NGQ5 310 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 FNDC8Q8TC99 324 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 CD99L2Q8TCZ2 262 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 RAB3CQ96E17 227 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 FOPNLQ96NB1 174 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 HBEGFQ99075 208 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 COMMD4Q9H0A8 199 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 FBXL2Q9UKC9 423 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 ANGPT4Q9Y264 503 aa6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 DDX60Q8IY21 1712 aaKnown RBP6.5□□□□□ -1.37
PDGFRA-206ENST00000508170 PHLPP1O60346 1717 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 TSPAN11A1L157 253 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 PRORSD1PA6NEY8 169 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 PRKNO60260 465 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 IGSF6O95976 241 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 IGHG4P01861 327 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 TACSTD2P09758 323 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 ZNF25P17030 456 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 TFDP2Q14188 446 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 SURF2Q15527 256 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 KCNJ8Q15842 424 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 CEACAM21Q3KPI0 293 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 EIPR1Q53HC9 387 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 OR2B11Q5JQS5 317 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 LEMD1Q68G75 181 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 C16orf82Q7Z2V1 217 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 ISCA2Q86U28 154 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 SKA3Q8IX90 412 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 LRRC25Q8N386 305 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 OR6N1Q8NGY5 312 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 SLC7A13Q8TCU3 470 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 DNASE2BQ8WZ79 361 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 EXTL1Q92935 676 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 ADOQ96SZ5 270 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 EBF4Q9BQW3 602 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 CHIAQ9BZP6 476 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 TLE6Q9H808 572 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 SLC25A19Q9HC21 320 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 OLFML3Q9NRN5 406 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 VPS29Q9UBQ0 182 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 AKAP11Q9UKA4 1901 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 NHSL1Q5SYE7 1610 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 KLF18A0A0U1RQI7 1052 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 C15orf65H3BRN8 121 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 ZG16O60844 167 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 WISP2O76076 250 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 NDUFB4O95168 129 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 THY1P04216 161 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 PROZP22891 400 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 CEACAM8P31997 349 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 OPRD1P41143 372 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 SULT1A1P50225 295 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 SULT1A2P50226 295 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 RAB25P57735 213 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 HILS1P60008 231 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 DGCR2P98153 550 aa6.49□□□□□ -1.37
PDGFRA-206ENST00000508170 ENTPD8Q5MY95 495 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms