RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 OPALINQ96PE5 141 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 DCLRE1CQ96SD1 692 aaKnown RBP12.26□□□□□ -0.45
RNF4-208ENST00000507247 C1QTNF5Q9BXJ0 243 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 OR51B6Q9H340 312 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 TRIM36Q9NQ86 728 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 FRRS1LQ9P0K9 344 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 SLC22A13Q9Y226 551 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 N6AMT1Q9Y5N5 214 aa12.26□□□□□ -0.45
RNF4-208ENST00000507247 PNMA8CA0A1B0GUJ8 204 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.25□□□□□ -0.45
RNF4-208ENST00000507247 A1L4Q6 167 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 DEFB108AA8MXU0 73 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 OGG1O15527 345 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 NGFP01138 241 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 LCATP04180 440 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 HSMCR30P0CW71 290 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 PTAFRP25105 342 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 LOXP28300 417 aaPredicted RBP12.25□□□□□ -0.45
RNF4-208ENST00000507247 PEX19P40855 299 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 TGM4P49221 684 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 BDH1Q02338 343 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 MRPL28Q13084 256 aaKnown RBP12.25□□□□□ -0.45
RNF4-208ENST00000507247 ALKBH1Q13686 389 aaKnown RBP12.25□□□□□ -0.45
RNF4-208ENST00000507247 CDK5R1Q15078 307 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 HIST2H2BCQ6DN03 193 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 TMEM108Q6UXF1 575 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 MEX3BQ6ZN04 569 aaKnown RBP12.25□□□□□ -0.45
RNF4-208ENST00000507247 COLCA1Q6ZS62 124 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 RFPL4BQ6ZWI9 263 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 FCGR1BQ92637 280 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 PLPPR2Q96GM1 343 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 COG8Q96MW5 612 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 MGLLQ99685 303 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 PBOV1Q9GZY1 135 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 POFUT1Q9H488 388 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 NGBQ9NPG2 151 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 NUFIP1Q9UHK0 495 aaKnown RBP12.25□□□□□ -0.45
RNF4-208ENST00000507247 OR52A1Q9UKL2 312 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 GTF2A1LQ9UNN4 478 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 CADP27708 2225 aa12.25□□□□□ -0.45
RNF4-208ENST00000507247 ATP6V1G2-DDX39BF2Z307 99 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 ABCD4O14678 606 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 ICMTO60725 284 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 SMPD2O60906 423 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 CRYAAP02489 173 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 APOC1P02654 83 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 TTRP02766 147 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 FAM157BP0CG42 384 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 JUNBP17275 347 aaPredicted RBP12.24□□□□□ -0.45
RNF4-208ENST00000507247 PSMB9P28065 219 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 GP2P55259 537 aaKnown RBP12.24□□□□□ -0.45
RNF4-208ENST00000507247 ERVS71-1P61550 626 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 MLLT11Q13015 90 aaPredicted RBP12.24□□□□□ -0.45
RNF4-208ENST00000507247 TIGD6Q17RP2 521 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 CCDC58Q4VC31 144 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 BEX5Q5H9J7 111 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 ARMCX4Q5H9R4 360 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 SYT6Q5T7P8 510 aaPredicted RBP12.24□□□□□ -0.45
RNF4-208ENST00000507247 DMKNQ6E0U4 476 aaPredicted RBP12.24□□□□□ -0.45
RNF4-208ENST00000507247 RPL22L1Q6P5R6 122 aaKnown RBP12.24□□□□□ -0.45
RNF4-208ENST00000507247 ELMOD2Q8IZ81 293 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 FAM222BQ8WU58 562 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 PGAM5Q96HS1 289 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 PSMG3-AS1Q96PY0 264 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 MOB1AQ9H8S9 216 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 ISYNA1Q9NPH2 558 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 TBCCD1Q9NVR7 557 aa12.24□□□□□ -0.45
RNF4-208ENST00000507247 TRBV2A0A0J9YWF9 115 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 ACOD1A6NK06 481 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 OR4C45A6NMZ5 311 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 CASKO14936 926 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 TBX1O43435 398 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 CLPTM1O96005 669 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 TFAP2AP05549 437 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 CELP19835 753 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 PCSK6P29122 969 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 RGS6P49758 472 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 CCR9P51686 369 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 UCP2P55851 309 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 TAS2R43P59537 309 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 TSTQ16762 297 aaKnown RBP12.23□□□□□ -0.45
RNF4-208ENST00000507247 ODF4Q2M2E3 257 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 GLYATL3Q5SZD4 288 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 BCL2L15Q5TBC7 163 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 ARL9Q6T311 187 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 PIAS4Q8N2W9 510 aaPredicted RBP12.23□□□□□ -0.45
RNF4-208ENST00000507247 OR2AE1Q8NHA4 323 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 ABHD4Q8TB40 342 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 HAVCR2Q8TDQ0 301 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 APOBEC3DQ96AK3 386 aaPredicted RBP12.23□□□□□ -0.45
RNF4-208ENST00000507247 RADILQ96JH8 1075 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 PGLYRP3Q96LB9 341 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 HS3ST6Q96QI5 342 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 KCNS3Q9BQ31 491 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 PDCD1LG2Q9BQ51 273 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 SOX7Q9BT81 388 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 ESRP2Q9H6T0 727 aaKnown RBP12.23□□□□□ -0.45
RNF4-208ENST00000507247 EIF3KQ9UBQ5 218 aaKnown RBP12.23□□□□□ -0.45
RNF4-208ENST00000507247 STARD10Q9Y365 291 aa12.23□□□□□ -0.45
RNF4-208ENST00000507247 UTP20O75691 2785 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms