RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SLC36A1Q7Z2H8 476 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 LHFPL4Q7Z7J7 247 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 DYNAPQ8N1N2 210 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 RPP25LQ8N5L8 163 aaKnown RBP5.75□□□□□ -1.49
VCAN-207ENST00000507162 FAM216BQ8N7L0 139 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 CELF2-AS1Q8N7Q2 184 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 LSMEM1Q8N8F7 131 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 CCDC63Q8NA47 563 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 OR5D13Q8NGL4 314 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 OR9Q1Q8NGQ5 310 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 DUS3LQ96G46 650 aaKnown RBP5.75□□□□□ -1.49
VCAN-207ENST00000507162 MRPL13Q9BYD1 178 aaKnown RBP5.75□□□□□ -1.49
VCAN-207ENST00000507162 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 SCOCQ9UIL1 159 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 ANGPT4Q9Y264 503 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 IFT52Q9Y366 437 aa5.75□□□□□ -1.49
VCAN-207ENST00000507162 UTP11Q9Y3A2 253 aaKnown RBP5.75□□□□□ -1.49
VCAN-207ENST00000507162 KMT2AQ03164 3969 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 A0A0G2JPF8 293 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 NKX6-3A6NJ46 265 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 IQCF6A8MYZ5 107 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 HNRNPCL2B2RXH8 293 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 HNRNPCL3B7ZW38 293 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 PRR23D1E9PI22 279 aaPredicted RBP5.74□□□□□ -1.49
VCAN-207ENST00000507162 LDLRAD4O15165 306 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 SGCEO43556 437 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 FMO6PO60774 539 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 HNRNPCL1O60812 293 aaKnown RBP5.74□□□□□ -1.49
VCAN-207ENST00000507162 RPLP1P05386 114 aaKnown RBP5.74□□□□□ -1.49
VCAN-207ENST00000507162 PRR23D2P0DMB1 279 aaPredicted RBP5.74□□□□□ -1.49
VCAN-207ENST00000507162 HNRNPCL4P0DMR1 293 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 CPA3P15088 417 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 ATF4P18848 351 aaPredicted RBP5.74□□□□□ -1.49
VCAN-207ENST00000507162 CA6P23280 308 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 COX7A1P24310 79 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 PRKAR1BP31321 381 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 SERPINB5P36952 375 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 DNAJB13P59910 316 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 NCALDP61601 193 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 RPL23AP62750 156 aaKnown RBP5.74□□□□□ -1.49
VCAN-207ENST00000507162 TXNL4AP83876 142 aaKnown RBP5.74□□□□□ -1.49
VCAN-207ENST00000507162 CASP8Q14790 479 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 MICBQ29980 383 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 ZNF260Q3ZCT1 412 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 WDR38Q5JTN6 314 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 C9orf152Q5JTZ5 239 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 SLC25A47Q6Q0C1 308 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 TIFABQ6ZNK6 161 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 RNF165Q6ZSG1 346 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 ZNF329Q86UD4 541 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 LCA5Q86VQ0 697 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 TRIML2Q8N7C3 387 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 KLHL30-AS1Q8NEE0 82 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 OR8J2Q8NGG1 315 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 OR5T2Q8NGG2 359 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 OR5M8Q8NGP6 311 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 SLC38A5Q8WUX1 472 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 SPRYD4Q8WW59 207 aaPredicted RBP5.74□□□□□ -1.49
VCAN-207ENST00000507162 RASD2Q96D21 266 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 RBP7Q96R05 134 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 PANX1Q96RD7 426 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 P2RX4Q99571 388 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 TM2D3Q9BRN9 247 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 HCAR1Q9BXC0 346 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 HEXA-AS1Q9H8Q6 139 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 EMC7Q9NPA0 242 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 DCDC2Q9UHG0 476 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 ZNF180Q9UJW8 692 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 EMCNQ9ULC0 261 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 AURKCQ9UQB9 309 aa5.74□□□□□ -1.49
VCAN-207ENST00000507162 TMEM247A6NEH6 219 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 VGLL3A8MV65 326 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 H3BUI4 141 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 CCL24O00175 119 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 KPNA4O00629 521 aaPredicted RBP5.73□□□□□ -1.49
VCAN-207ENST00000507162 ACOT8O14734 319 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 IFNA6P05013 189 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 SCG5P05408 212 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 DBHP09172 617 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 COX5BP10606 129 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 SELLP14151 372 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 NDUFB7P17568 137 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 S100A3P33764 101 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 CDKN2CP42773 168 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 ZNF133P52736 654 aaPredicted RBP5.73□□□□□ -1.49
VCAN-207ENST00000507162 UGT2B15P54855 530 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 CDH12P55289 794 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 GMFBP60983 142 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 SELPLGQ14242 412 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 ENDOGQ14249 297 aaKnown RBP5.73□□□□□ -1.49
VCAN-207ENST00000507162 SSX2Q16385 188 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 ZNF74Q16587 644 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 ABCA11PQ4W5N1 156 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 SPANXN4Q5MJ08 99 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 OR2W3Q7Z3T1 314 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 NANOGNBQ7Z5D8 188 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 MKXQ8IYA7 352 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 GCSAMQ8N6F7 178 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 PCYOX1LQ8NBM8 494 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 SLC26A10Q8NG04 563 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms