RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ZNF283Q8N7M2 679 aa11.03□□□□□ -0.64
TCOF1-210ENST00000506767 BPIFB6Q8NFQ5 453 aa11.03□□□□□ -0.64
TCOF1-210ENST00000506767 SLC25A40Q8TBP6 338 aa11.03□□□□□ -0.64
TCOF1-210ENST00000506767 TRAF4Q9BUZ4 470 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-210ENST00000506767 MRPL37Q9BZE1 423 aaKnown RBP11.03□□□□□ -0.64
TCOF1-210ENST00000506767 OR2J1Q9GZK6 312 aa11.03□□□□□ -0.64
TCOF1-210ENST00000506767 FAIMQ9NVQ4 179 aa11.03□□□□□ -0.64
TCOF1-210ENST00000506767 DIMT1Q9UNQ2 313 aaKnown RBP11.03□□□□□ -0.64
TCOF1-210ENST00000506767 PCDHGB5Q9Y5G0 923 aa11.03□□□□□ -0.64
TCOF1-210ENST00000506767 ITPR2Q14571 2701 aa11.03□□□□□ -0.64
TCOF1-210ENST00000506767 C5orf63A6NC05 138 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 EFCAB10A6NFE3 127 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 METTL15A6NJ78 407 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 ACOD1A6NK06 481 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 B9A039 149 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 SLC1A7O00341 560 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 FAM20BO75063 409 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 LCATP04180 440 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 CCDC159P0C7I6 412 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 SLC2A1P11166 492 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 CD53P19397 219 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 SLC6A9P48067 706 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 MMP16P51512 607 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 RIDAP52758 137 aaKnown RBP11.02□□□□□ -0.65
TCOF1-210ENST00000506767 ZNF121P58317 390 aaPredicted RBP11.02□□□□□ -0.65
TCOF1-210ENST00000506767 PSMA6P60900 246 aaKnown RBP11.02□□□□□ -0.65
TCOF1-210ENST00000506767 GALEQ14376 348 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 SNAI3Q3KNW1 292 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 ZNF718Q3SXZ3 478 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 TMEM255AQ5JRV8 349 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 AGAP6Q5VW22 663 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 FBXW12Q6X9E4 464 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 PLEKHG7Q6ZR37 379 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 KCTD20Q7Z5Y7 419 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 LHFPL3Q86UP9 236 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 LRP11Q86VZ4 500 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 OR5L1Q8NGL2 311 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 SYNPRQ8TBG9 265 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 KLF14Q8TD94 323 aaPredicted RBP11.02□□□□□ -0.65
TCOF1-210ENST00000506767 SNX33Q8WV41 574 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 RNF166Q96A37 237 aaPredicted RBP11.02□□□□□ -0.65
TCOF1-210ENST00000506767 TMEM80Q96HE8 168 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 CNBD2Q96M20 576 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 PLK3Q9H4B4 646 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 Q9H521 79 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 SP140LQ9H930 580 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 CBLN4Q9NTU7 201 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 FAM206AQ9NX38 181 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 ERVK13-1Q9NX77 482 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 UBAP1Q9NZ09 502 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 ZNF319Q9P2F9 582 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 ST6GALNAC2Q9UJ37 374 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 IKZF2Q9UKS7 526 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 LAMP3Q9UQV4 416 aa11.02□□□□□ -0.65
TCOF1-210ENST00000506767 TMEM269A0A1B0GVZ9 245 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 OVOL3O00110 214 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 ATE1O95260 518 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 CLPTM1O96005 669 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 PNPP00491 289 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 IGHV3-13P01766 116 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 RAF1P04049 648 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 KRT8P05787 483 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 LIMS3P0CW19 117 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 LIMS4P0CW20 117 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 MPV17P39210 176 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 MVKQ03426 396 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 ST3GAL4Q11206 333 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 SPATA46Q5T0L3 261 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 LIPNQ5VXI9 398 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 ZNF540Q8NDQ6 660 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 OR52H1Q8NGJ2 320 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 SPSB4Q96A44 273 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 HAVCR1Q96D42 359 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 ALG8Q9BVK2 526 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 MYEF2Q9P2K5 600 aaKnown RBP11.01□□□□□ -0.65
TCOF1-210ENST00000506767 FZR1Q9UM11 496 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 R4GMQ9 66 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 DSCAMO60469 2012 aa11.01□□□□□ -0.65
TCOF1-210ENST00000506767 XRCC2O43543 280 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 ANXA2P07355 339 aaKnown RBP11□□□□□ -0.65
TCOF1-210ENST00000506767 RAC2P15153 192 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 KITLGP21583 273 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 CRHBPP24387 322 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 GCH1P30793 250 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 ETV1P50549 477 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 KLF3P57682 345 aaPredicted RBP11□□□□□ -0.65
TCOF1-210ENST00000506767 OR12D2P58182 307 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 ACTA2P62736 377 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 ACTG2P63267 376 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 SLC35A2P78381 396 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 MFGE8Q08431 387 aaPredicted RBP11□□□□□ -0.65
TCOF1-210ENST00000506767 PSG7Q13046 419 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 GK2Q14410 553 aaPredicted RBP11□□□□□ -0.65
TCOF1-210ENST00000506767 HLXQ14774 488 aaPredicted RBP11□□□□□ -0.65
TCOF1-210ENST00000506767 ZNF829Q3KNS6 432 aaPredicted RBP11□□□□□ -0.65
TCOF1-210ENST00000506767 TP53I3Q53FA7 332 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 GLYATL3Q5SZD4 288 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 AHSA2Q719I0 299 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 FAM57BQ71RH2 274 aa11□□□□□ -0.65
TCOF1-210ENST00000506767 SYS1Q8N2H4 156 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms