RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 HSDL1Q3SXM5 330 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 HSP90AB3PQ58FF7 597 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 LRRC66Q68CR7 880 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 GUSBP11Q6P575 273 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 BZW1Q7L1Q6 419 aaKnown RBP1.36□□□□□ -2.19
GYPB-207ENST00000506679 CMC1Q7Z7K0 106 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 CALHM3Q86XJ0 350 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 NKAIN4Q8IVV8 208 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 ZNF101Q8IZC7 436 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 SLC35G3Q8N808 338 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 TMEM105Q8N8V8 129 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 TTLQ8NG68 377 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 OR11H7Q8NGC8 314 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 OR10G6Q8NH81 332 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 LRRC29Q8WV35 223 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 EEF1AKMT3Q96AZ1 226 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 RNF145Q96MT1 663 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 MTG1Q9BT17 334 aaPredicted RBP1.36□□□□□ -2.19
GYPB-207ENST00000506679 RSG1Q9BU20 258 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 NCOR1P1Q9H4R4 102 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 EXO5Q9H790 373 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 SLC17A7Q9P2U7 560 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 ENOPH1Q9UHY7 261 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 SLC17A4Q9Y2C5 497 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 CAB39Q9Y376 341 aaPredicted RBP1.36□□□□□ -2.19
GYPB-207ENST00000506679 SVILO95425 2214 aa1.36□□□□□ -2.19
GYPB-207ENST00000506679 MUC19Q7Z5P9 8384 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 TRAV19A0A0A6YYK7 116 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 IGHV3OR16-9A0A0B4J2B5 98 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 IGHV1-69DA0A0B4J2H0 117 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 A0A1B0GW55 424 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 SMCO2A6NFE2 343 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 OR2AG2A6NM03 316 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 H7C1H1 209 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 PLPP1O14494 284 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 CASQ2O14958 399 aaPredicted RBP1.35□□□□□ -2.19
GYPB-207ENST00000506679 EIF3HO15372 352 aaKnown RBP eCLIP1.35□□□□□ -2.19
GYPB-207ENST00000506679 CDH16O75309 829 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 OR2F2O95006 317 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 FGFR1OPO95684 399 aaKnown RBP1.35□□□□□ -2.19
GYPB-207ENST00000506679 DUX4L2P0CJ85 424 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 DUX4L3P0CJ86 424 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 DUX4L5P0CJ88 424 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 DUX4L6P0CJ89 424 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 DUX4L7P0CJ90 424 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 GALP22466 123 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 OR1E1P30953 314 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 RBM34P42696 430 aaKnown RBP1.35□□□□□ -2.19
GYPB-207ENST00000506679 EIF3EP60228 445 aaKnown RBP1.35□□□□□ -2.19
GYPB-207ENST00000506679 TGM3Q08188 693 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 SIGLEC14Q08ET2 396 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 IL18Q14116 193 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 TEX30Q5JUR7 227 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 SPINT4Q6UDR6 99 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 SSX9Q7RTT3 188 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 SCD5Q86SK9 330 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 KRTAP13-1Q8IUC0 172 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 LRRC52Q8N7C0 313 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 APCDD1LQ8NCL9 501 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 OR5K2Q8NHB8 316 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 FAM81AQ8TBF8 368 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 KLF14Q8TD94 323 aaPredicted RBP1.35□□□□□ -2.19
GYPB-207ENST00000506679 APH1BQ8WW43 257 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 NRBF2Q96F24 287 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 NAP1L5Q96NT1 182 aaPredicted RBP1.35□□□□□ -2.19
GYPB-207ENST00000506679 ANP32EQ9BTT0 268 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 C20orf24Q9BUV8 137 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 ZSCAN16Q9H4T2 348 aaPredicted RBP1.35□□□□□ -2.19
GYPB-207ENST00000506679 TMEM185BQ9H7F4 350 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 ZNF160Q9HCG1 818 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 MED4Q9NPJ6 270 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 DUX4Q9UBX2 424 aa1.35□□□□□ -2.19
GYPB-207ENST00000506679 NID2Q14112 1375 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 NINLQ9Y2I6 1382 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 ZNF407Q9C0G0 2248 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 A0A1B0GUH1 482 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 OR5H1A6NKK0 313 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 GABRR3A8MPY1 467 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 C16orf90A8MZG2 172 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 WRBO00258 174 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 TAAR5O14804 337 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 LSM1O15116 133 aaKnown RBP1.34□□□□□ -2.19
GYPB-207ENST00000506679 CACNG3O60359 315 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 LHBP01229 141 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 MRPL19P49406 292 aaKnown RBP1.34□□□□□ -2.19
GYPB-207ENST00000506679 PRLHRP49683 370 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 RAB9AP51151 201 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 RPS15P62841 145 aaKnown RBP1.34□□□□□ -2.19
GYPB-207ENST00000506679 LIPEQ05469 1076 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 PPIDQ08752 370 aaKnown RBP1.34□□□□□ -2.19
GYPB-207ENST00000506679 MERTKQ12866 999 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 PSMD5Q16401 504 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 TTC23LQ6PF05 361 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 MRPL55Q7Z7F7 128 aaKnown RBP1.34□□□□□ -2.19
GYPB-207ENST00000506679 LUZP2Q86TE4 346 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 FAM71AQ8IYT1 594 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 OR4M1Q8NGD0 313 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 LYPD6BQ8NI32 183 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 IP6K3Q96PC2 410 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 ZNF317Q96PQ6 595 aaPredicted RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms