RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 ZMAT1Q5H9K5 638 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 TEX30Q5JUR7 227 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 SLC35D3Q5M8T2 416 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 LCN1P1Q5VSP4 162 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 SLX4IPQ5VYV7 408 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 TIGD4Q8IY51 512 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 ZNF786Q8N393 782 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 ZNF799Q96GE5 643 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 C1QTNF5Q9BXJ0 243 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 BPESC1Q9GZL8 116 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 MARCH7Q9H992 704 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 MSL2Q9HCI7 577 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 S100A14Q9HCY8 104 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 CYSLTR2Q9NS75 346 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 DECR2Q9NUI1 292 aa11.17□□□□□ -0.62
TCOF1-209ENST00000506630 DDX28Q9NUL7 540 aaKnown RBP11.17□□□□□ -0.62
TCOF1-209ENST00000506630 CGGBP1Q9UFW8 167 aaPredicted RBP11.17□□□□□ -0.62
TCOF1-209ENST00000506630 TMEFF2Q9UIK5 374 aaPredicted RBP11.17□□□□□ -0.62
TCOF1-209ENST00000506630 PURGQ9UJV8 347 aaKnown RBP11.17□□□□□ -0.62
TCOF1-209ENST00000506630 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.17□□□□□ -0.623e-9■■■■□ 25.3
TCOF1-209ENST00000506630 ZSCAN5BA6NJL1 495 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 EI24O14681 340 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 PRKYO43930 277 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 KITLGP21583 273 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 SLC2A5P22732 501 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 HSD11B1P28845 292 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 LIPAP38571 399 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 NR4A2P43354 598 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 PRKXP51817 358 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 GRB2P62993 217 aaKnown RBP11.16□□□□□ -0.62
TCOF1-209ENST00000506630 LOXL1Q08397 574 aaPredicted RBP11.16□□□□□ -0.62
TCOF1-209ENST00000506630 SHFQ7M4L6 423 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 NAA40Q86UY6 237 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 OR5AS1Q8N127 324 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 ZNF283Q8N7M2 679 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 TCEANCQ8N8B7 351 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 ZNF540Q8NDQ6 660 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 ST7LQ8TDW4 575 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 RDH5Q92781 318 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 STMN2Q93045 179 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 OSBPL10Q9BXB5 764 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 SAP30LQ9HAJ7 183 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 ORC6Q9Y5N6 252 aa11.16□□□□□ -0.62
TCOF1-209ENST00000506630 CCDC182A6NF36 153 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 VWC2LB2RUY7 222 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 CDC14BO60729 498 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 IGHV1-46P01743 117 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 LYNP07948 512 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 MRPL3P09001 348 aaKnown RBP11.15□□□□□ -0.62
TCOF1-209ENST00000506630 SLC2A1P11166 492 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 RAC2P15153 192 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 SRD5A1P18405 259 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 USF1P22415 310 aaPredicted RBP11.15□□□□□ -0.62
TCOF1-209ENST00000506630 COL8A2P25067 703 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 SLC15A1P46059 708 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 MALLQ13021 153 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 FAM209AQ5JX71 171 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 C12orf73Q69YU5 71 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 CYB5R2Q6BCY4 276 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 OR2T2Q6IF00 324 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 DRAM2Q6UX65 266 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 BCDIN3DQ7Z5W3 292 aaKnown RBP11.15□□□□□ -0.62
TCOF1-209ENST00000506630 YIPF5Q969M3 257 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 KCNJ15Q99712 375 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 ABHD6Q9BV23 337 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 GABARAPL3Q9BY60 117 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 CHODLQ9H9P2 273 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 NKIRAS2Q9NYR9 191 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 DNAJC27Q9NZQ0 273 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 H2AFY2Q9P0M6 372 aaPredicted RBP11.15□□□□□ -0.62
TCOF1-209ENST00000506630 ZDHHC8Q9ULC8 765 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 N6AMT1Q9Y5N5 214 aa11.15□□□□□ -0.62
TCOF1-209ENST00000506630 IGHV4-61A0A0C4DH41 118 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 LMX1BO60663 402 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 H2BFMP0C1H6 154 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 ACHEP22303 614 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 TNFSF4P23510 183 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 GIFP27352 417 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 OTX1P32242 354 aaPredicted RBP11.14□□□□□ -0.63
TCOF1-209ENST00000506630 POLR2IP36954 125 aaKnown RBP11.14□□□□□ -0.63
TCOF1-209ENST00000506630 GPR6P46095 362 aaPredicted RBP11.14□□□□□ -0.63
TCOF1-209ENST00000506630 CX3CR1P49238 355 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 PRSS12P56730 875 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 SNAI3Q3KNW1 292 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 FBXW12Q6X9E4 464 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 COLCA1Q6ZS62 124 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 USP51Q70EK9 711 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 MRPL21Q7Z2W9 205 aaKnown RBP11.14□□□□□ -0.63
TCOF1-209ENST00000506630 PQLC1Q8N2U9 271 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 CBR4Q8N4T8 237 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 BHLHE23Q8NDY6 225 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 OR2Z1Q8NG97 314 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 OTOSQ8NHW6 89 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 TMEM163Q8TC26 289 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 THEM6Q8WUY1 208 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 RNF133Q8WVZ7 376 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 HAVCR1Q96D42 359 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 ELMOD3Q96FG2 381 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 IL4I1Q96RQ9 567 aa11.14□□□□□ -0.63
TCOF1-209ENST00000506630 AMELYQ99218 206 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms