RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 HINT3Q9NQE9 182 aaKnown RBP6.22□□□□□ -1.41
GYPB-206ENST00000506516 DECR2Q9NUI1 292 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 USE1Q9NZ43 259 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 CGGBP1Q9UFW8 167 aaPredicted RBP6.22□□□□□ -1.41
GYPB-206ENST00000506516 TMEFF2Q9UIK5 374 aaPredicted RBP6.22□□□□□ -1.41
GYPB-206ENST00000506516 ZDHHC8Q9ULC8 765 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 STARD10Q9Y365 291 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 TMEM14AQ9Y6G1 99 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 ALPK2Q86TB3 2170 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 RAI1Q7Z5J4 1906 aaPredicted RBP6.22□□□□□ -1.41
GYPB-206ENST00000506516 ABCA4P78363 2273 aa6.22□□□□□ -1.41
GYPB-206ENST00000506516 POLQO75417 2590 aa6.21□□□□□ -1.41
GYPB-206ENST00000506516 NAV2Q8IVL1 2488 aa6.21□□□□□ -1.41
GYPB-206ENST00000506516 LOC390937A0A1W2PQ73 354 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 TRIM64A6NGJ6 449 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 TRIM64BA6NI03 449 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 SLC22A31A6NKX4 558 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 C17orf100A8MU93 164 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 H7C1Q1 480 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 M0R135 149 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 NDUFS8O00217 210 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 EI24O14681 340 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 TPD52L2O43399 206 aaKnown RBP6.21□□□□□ -1.42
GYPB-206ENST00000506516 PRKYO43930 277 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 TIMM8AO60220 97 aaPredicted RBP6.21□□□□□ -1.42
GYPB-206ENST00000506516 ALPLP05186 524 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 LYNP07948 512 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 INHBBP09529 407 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 H2BFMP0C1H6 154 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 ACSM4P0C7M7 580 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 DAOP14920 347 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 RAC2P15153 192 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 SLC25A16P16260 332 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 SELEP16581 610 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 HSD11B1P28845 292 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 EPHA2P29317 976 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 POLR2IP36954 125 aaKnown RBP6.21□□□□□ -1.42
GYPB-206ENST00000506516 GATA4P43694 442 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 SLC6A9P48067 706 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 ZNF81P51508 661 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 EFNB1P98172 346 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 PSG7Q13046 419 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 MAD2L1BPQ15013 274 aaPredicted RBP6.21□□□□□ -1.42
GYPB-206ENST00000506516 CARTPTQ16568 116 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 MSMPQ1L6U9 139 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 RSPO1Q2MKA7 263 aaPredicted RBP6.21□□□□□ -1.42
GYPB-206ENST00000506516 KRTAP27-1Q3LI81 207 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 FAM209AQ5JX71 171 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 NXNL2Q5VZ03 156 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 KCTD18Q6PI47 426 aaPredicted RBP6.21□□□□□ -1.42
GYPB-206ENST00000506516 DNM1P46Q6ZS02 220 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 SLC16A9Q7RTY1 509 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 GID4Q8IVV7 300 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 MRPL41Q8IXM3 137 aaKnown RBP6.21□□□□□ -1.42
GYPB-206ENST00000506516 TIGD4Q8IY51 512 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 CBR4Q8N4T8 237 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 ZNF525Q8N782 197 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 OR8J1Q8NGP2 316 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 OTOSQ8NHW6 89 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 TMEM163Q8TC26 289 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 THEM6Q8WUY1 208 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 RFKQ969G6 155 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 ZNF799Q96GE5 643 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 IL4I1Q96RQ9 567 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 DIRC2Q96SL1 478 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 ABHD6Q9BV23 337 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 SSBP4Q9BWG4 385 aaPredicted RBP6.21□□□□□ -1.42
GYPB-206ENST00000506516 C1QTNF5Q9BXJ0 243 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 REG4Q9BYZ8 158 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 YIPF3Q9GZM5 350 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 EGLN1Q9GZT9 426 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 TPK1Q9H3S4 243 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 PNRC2Q9NPJ4 139 aaKnown RBP6.21□□□□□ -1.42
GYPB-206ENST00000506516 DDX28Q9NUL7 540 aaKnown RBP6.21□□□□□ -1.42
GYPB-206ENST00000506516 IMPAD1Q9NX62 359 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 NKIRAS2Q9NYR9 191 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 MYEF2Q9P2K5 600 aaKnown RBP6.21□□□□□ -1.42
GYPB-206ENST00000506516 LAMP5Q9UJQ1 280 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 PURGQ9UJV8 347 aaKnown RBP6.21□□□□□ -1.42
GYPB-206ENST00000506516 DSCAMO60469 2012 aa6.21□□□□□ -1.42
GYPB-206ENST00000506516 SNTNA6NMZ2 147 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 SMAD7O15105 426 aaKnown RBP6.2□□□□□ -1.42
GYPB-206ENST00000506516 SPRY3O43610 288 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 LY6HO94772 140 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 KITLGP21583 273 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 SLC2A5P22732 501 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 TNFSF4P23510 183 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 ATP6V1E1P36543 226 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 MPV17P39210 176 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 MMP15P51511 669 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 PRKXP51817 358 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 TMEM33P57088 247 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 MRPS11P82912 194 aaKnown RBP6.2□□□□□ -1.42
GYPB-206ENST00000506516 TMED1Q13445 227 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 TSTQ16762 297 aaKnown RBP6.2□□□□□ -1.42
GYPB-206ENST00000506516 ZIK1Q3SY52 487 aaPredicted RBP6.2□□□□□ -1.42
GYPB-206ENST00000506516 AADACL4Q5VUY2 407 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 DEGS2Q6QHC5 323 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 FBXW12Q6X9E4 464 aa6.2□□□□□ -1.42
GYPB-206ENST00000506516 COLCA1Q6ZS62 124 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms