RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SCAMP2O15127 329 aaKnown RBP1.95□□□□□ -2.1
CHD1-203ENST00000505657 LSM8O95777 96 aaKnown RBP1.95□□□□□ -2.1
CHD1-203ENST00000505657 CSNK2A2P19784 350 aaPredicted RBP1.95□□□□□ -2.1
CHD1-203ENST00000505657 KIR3DL2P43630 455 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 ARG2P78540 354 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 RAD51Q06609 339 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 SPAG1Q07617 926 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 TCP10Q12799 353 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 DNAJC3Q13217 504 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 GABRA6Q16445 453 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 SNRNP35Q16560 246 aaKnown RBP1.95□□□□□ -2.1
CHD1-203ENST00000505657 KLHL40Q2TBA0 621 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 TRMT5Q32P41 509 aaKnown RBP1.95□□□□□ -2.1
CHD1-203ENST00000505657 DNLZQ5SXM8 178 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 GPR107Q5VW38 600 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 NEGR1Q7Z3B1 354 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 JAGN1Q8N5M9 183 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 C15orf40Q8WUR7 153 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 APH1AQ96BI3 265 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 L3HYPDHQ96EM0 354 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 ZNF382Q96SR6 550 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 OR2AG1Q9H205 316 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 TMEM38AQ9H6F2 299 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 MRM3Q9HC36 420 aaKnown RBP1.95□□□□□ -2.1
CHD1-203ENST00000505657 DDX19BQ9UMR2 479 aa1.95□□□□□ -2.1
CHD1-203ENST00000505657 RCL1Q9Y2P8 373 aaKnown RBP1.95□□□□□ -2.1
CHD1-203ENST00000505657 TMEM131Q92545 1883 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 ANKRD12Q6UB98 2062 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 IGLV1-36A0A0B4J1U3 117 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 LOC100653049A0A140TA62 436 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 TMEM120BA0PK00 339 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 A8MUU9 505 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 K7EMT4 169 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 PLPP1O14494 284 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 ZBTB5O15062 677 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 RRP8O43159 456 aaKnown RBP1.94□□□□□ -2.1
CHD1-203ENST00000505657 RAD51CO43502 376 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 KRT34O76011 436 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 HLA-HP01893 362 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 HBE1P02100 147 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 OR56A5P0C7T3 313 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 ZNF806P0C7X5 589 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 F2RP25116 425 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 RFC3P40938 356 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 SERPINB8P50452 374 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 SMUG1Q53HV7 270 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 BEX5Q5H9J7 111 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 STUMQ69YW2 141 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 MRPL55Q7Z7F7 128 aaKnown RBP1.94□□□□□ -2.1
CHD1-203ENST00000505657 CMTM8Q8IZV2 173 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 C8orf31Q8N9H6 132 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 SNX31Q8N9S9 440 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 NECAP1Q8NC96 275 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 OR8U1Q8NH10 309 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 OR51E1Q8TCB6 317 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 APH1BQ8WW43 257 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 CERS2Q96G23 380 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 NARS2Q96I59 477 aaKnown RBP1.94□□□□□ -2.1
CHD1-203ENST00000505657 JSRP1Q96MG2 331 aaPredicted RBP1.94□□□□□ -2.1
CHD1-203ENST00000505657 ZNF317Q96PQ6 595 aaPredicted RBP1.94□□□□□ -2.1
CHD1-203ENST00000505657 OSBPL11Q9BXB4 747 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 NAA50Q9GZZ1 169 aaKnown RBP1.94□□□□□ -2.1
CHD1-203ENST00000505657 CLSTN2Q9H4D0 955 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 RGCCQ9H4X1 137 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 EDA2RQ9HAV5 297 aa1.94□□□□□ -2.1
CHD1-203ENST00000505657 PEF1Q9UBV8 284 aaKnown RBP1.94□□□□□ -2.1
CHD1-203ENST00000505657 YARS2Q9Y2Z4 477 aaKnown RBP1.94□□□□□ -2.1
CHD1-203ENST00000505657 TSSC4Q9Y5U2 329 aaPredicted RBP1.94□□□□□ -2.1
CHD1-203ENST00000505657 MROH7Q68CQ1 1323 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 A0A0U1RQV1 116 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 TSPAN11A1L157 253 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 ZNF233A6NK53 670 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 NCBP2LA6PVI3 153 aaKnown RBP1.93□□□□□ -2.1
CHD1-203ENST00000505657 BOLA2-SMG1P6H3BVE0 249 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 H7C1H1 209 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 OXTP01178 125 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 MBP02144 154 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 CT45A6P0DMU7 189 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 CT45A5P0DMU8 189 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 CT45A7P0DMV0 189 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 RNASE2P10153 161 aaKnown RBP1.93□□□□□ -2.1
CHD1-203ENST00000505657 SRMP19623 302 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 RAB3BP20337 219 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 U2AF2P26368 475 aaKnown RBP eCLIP1.93□□□□□ -2.12e-6■■□□□ 14.5
CHD1-203ENST00000505657 GPR1P46091 355 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 SEMG2Q02383 582 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 ZNF816Q0VGE8 651 aaPredicted RBP1.93□□□□□ -2.1
CHD1-203ENST00000505657 PGGHGQ32M88 737 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 CAVIN4Q5BKX8 364 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 CT45A1Q5HYN5 189 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 TPTE2P1Q5T6R2 138 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 PRR9Q5T870 116 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 METTL21CQ5VZV1 264 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 FAM122BQ7Z309 247 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 CBLN2Q8IUK8 224 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 ZNF547Q8IVP9 402 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 INO80EQ8NBZ0 244 aaPredicted RBP1.93□□□□□ -2.1
CHD1-203ENST00000505657 PROKR2Q8NFJ6 384 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 OR10AD1Q8NGE0 317 aa1.93□□□□□ -2.1
CHD1-203ENST00000505657 OR52E2Q8NGJ4 325 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms