RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 APH1AQ96BI3 265 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 FLYWCH2Q96CP2 140 aaKnown RBP3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 MED4Q9NPJ6 270 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 MCUBQ9NWR8 336 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 CLN6Q9NWW5 311 aa3.03□□□□□ -1.92
TRAPPC13-205ENST00000504243 MROH7Q68CQ1 1323 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 SMIM26A0A096LP01 95 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 HSBP1O75506 76 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 ZNF806P0C7X5 589 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 GPR1P46091 355 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 SERPINB8P50452 374 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 ZNF121P58317 390 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 ZNF33AQ06730 810 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 DNAJC3Q13217 504 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 KIR2DS1Q14954 304 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 RBMY1FQ15415 496 aaKnown RBP3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 ZNF684Q5T5D7 378 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 SAXO2Q658L1 398 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 Q6ZR03 302 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 CBLN2Q8IUK8 224 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 WDFY1Q8IWB7 410 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 INO80EQ8NBZ0 244 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 RGP1Q92546 391 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 RAB1CQ92928 201 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 CALN1Q9BXU9 219 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 SLIRPQ9GZT3 109 aaKnown RBP3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 FANCEQ9HB96 536 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 TMEM27Q9HBJ8 222 aa3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 YARS2Q9Y2Z4 477 aaKnown RBP3.02□□□□□ -1.93
TRAPPC13-205ENST00000504243 IGSF9BQ9UPX0 1349 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 A0A1B0GTQ1 180 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 RTL8CO15255 209 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 APCSP02743 223 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 CISD3P0C7P0 127 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 RAB4AP20338 218 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 USF1P22415 310 aaPredicted RBP3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 NBL1P41271 181 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 BCAP31P51572 246 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 SYNJ2BPP57105 145 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 CYP24A1Q07973 514 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 GABRA6Q16445 453 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 MPV17L2Q567V2 206 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 AVPI1Q5T686 147 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 TMEM205Q6UW68 189 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 ZNF321PQ8N8H1 164 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 MNS1Q8NEH6 495 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 OR4K5Q8NGD3 323 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 OR51F2Q8NH61 342 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 GPX8Q8TED1 209 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 GLYATL2Q8WU03 294 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 C9orf72Q96LT7 481 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 ZNF488Q96MN9 340 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 RNF145Q96MT1 663 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 OPALINQ96PE5 141 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 UQCC2Q9BRT2 126 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 BLZF1Q9H2G9 400 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 SLC38A10Q9HBR0 1119 aa3.01□□□□□ -1.93
TRAPPC13-205ENST00000504243 PALLDQ8WX93 1383 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 PIK3R4Q99570 1358 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 LINC00854A0A1B0GVQ3 168 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 GABRR3A8MPY1 467 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 NDUFC2-KCTD14E9PQ53 114 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 SIVA1O15304 175 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 CHST10O43529 356 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 XRCC2O43543 280 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 NMT2O60551 498 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 SLC22A5O76082 557 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 YIF1AO95070 293 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 TDP2O95551 362 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 CTSLP07711 333 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 MYL9P24844 172 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 ETV1P50549 477 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 CCNG1P51959 295 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 RAB11AP62491 216 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 CDK5Q00535 292 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 LOXL1Q08397 574 aaPredicted RBP3□□□□□ -1.93
TRAPPC13-205ENST00000504243 DMTNQ08495 405 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 EIF4EBP1Q13541 118 aaPredicted RBP3□□□□□ -1.93
TRAPPC13-205ENST00000504243 DOC2AQ14183 400 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 TFDP2Q14188 446 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 PIGHQ14442 188 aaPredicted RBP3□□□□□ -1.93
TRAPPC13-205ENST00000504243 RAB11BQ15907 218 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 ABCA11PQ4W5N1 156 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 NTM-AS1Q6ZSK4 140 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 UNC93AQ86WB7 457 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 UBALD2Q8IYN6 164 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 PDCL2Q8N4E4 241 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 C8orf31Q8N9H6 132 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 LRRC75AQ8NAA5 344 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 RPEQ96AT9 228 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 L3HYPDHQ96EM0 354 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 C8orf33Q9H7E9 229 aaPredicted RBP3□□□□□ -1.93
TRAPPC13-205ENST00000504243 SIRT7Q9NRC8 400 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 NECAP2Q9NVZ3 263 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 ADA2Q9NZK5 511 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 ADAMTS13Q76LX8 1427 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 TMEM94Q12767 1356 aa3□□□□□ -1.93
TRAPPC13-205ENST00000504243 IGHV1-69DA0A0B4J2H0 117 aa2.99□□□□□ -1.93
TRAPPC13-205ENST00000504243 A0A0J9YXV3 536 aa2.99□□□□□ -1.93
TRAPPC13-205ENST00000504243 C7orf66A4D0T2 115 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms