RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 GASTP01350 101 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 IGHV2-70P01814 119 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 IGHV4-39P01824 125 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 CLPSP04118 112 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 ATP1B1P05026 303 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 SOD3P08294 240 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 CSF1P09603 554 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 CLEC2LP0C7M8 214 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 LIMS3P0CW19 117 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 LIMS4P0CW20 117 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 CALCBP10092 127 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 SLC25A4P12235 298 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 CXCL3P19876 107 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 PAICSP22234 425 aaKnown RBP4.57□□□□□ -1.68
HTT-202ENST00000502820 UQCRC2P22695 453 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 GIFP27352 417 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 MPGP29372 298 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 SSTR4P31391 388 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 TIA1P31483 386 aaKnown RBP eCLIP4.57□□□□□ -1.68
HTT-202ENST00000502820 BSGP35613 385 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 RBM34P42696 430 aaKnown RBP4.57□□□□□ -1.68
HTT-202ENST00000502820 CRATP43155 626 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 MVDP53602 400 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 GAS1P54826 345 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 CDH11P55287 796 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 ZP1P60852 638 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 RPS13P62277 151 aaKnown RBP4.57□□□□□ -1.68
HTT-202ENST00000502820 ACTA2P62736 377 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 ACTG2P63267 376 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 RNF4P78317 190 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 PLIN5Q00G26 463 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 DEFA5Q01523 94 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 ID2Q02363 134 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 SLC3A1Q07837 685 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 TSPAN31Q12999 210 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 GGTLC2Q14390 218 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 CPSF6Q16630 551 aaKnown RBP eCLIP4.57□□□□□ -1.68
HTT-202ENST00000502820 PNLIPRP3Q17RR3 467 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 ZNF791Q3KP31 576 aaPredicted RBP4.57□□□□□ -1.68
HTT-202ENST00000502820 EIPR1Q53HC9 387 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 PAN3Q58A45 887 aaKnown RBP4.57□□□□□ -1.68
HTT-202ENST00000502820 C18orf63Q68DL7 685 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 AWAT2Q6E213 333 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 FAM166AQ6J272 317 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 SMARCD3Q6STE5 483 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 ZNF322Q6U7Q0 402 aaPredicted RBP4.57□□□□□ -1.68
HTT-202ENST00000502820 CLEC2AQ6UVW9 174 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 DRAM2Q6UX65 266 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 LRRN1Q6UXK5 716 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 TMEM91Q6ZNR0 172 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 DGAT2L6Q6ZPD8 337 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 TMPRSS11FQ6ZWK6 438 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 LINGO2Q7L985 606 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 YRDCQ86U90 279 aaKnown RBP4.57□□□□□ -1.68
HTT-202ENST00000502820 ANKRD46Q86W74 232 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 ANGPTL5Q86XS5 388 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 C9orf40Q8IXQ3 194 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 C10orf111Q8N326 155 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 ZNF561Q8N587 486 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 COMMD1Q8N668 190 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 ACBD7Q8N6N7 88 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 SAMD12Q8N8I0 201 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 C7orf57Q8NEG2 295 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 DNAAF1Q8NEP3 725 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 OR10K1Q8NGX5 313 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 BBS10Q8TAM1 723 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 STOML3Q8TAV4 291 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 NUBPLQ8TB37 319 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 TRMT10AQ8TBZ6 339 aaKnown RBP4.57□□□□□ -1.68
HTT-202ENST00000502820 DOK4Q8TEW6 326 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 DIO2Q92813 273 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 MALSU1Q96EH3 234 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 SENP5Q96HI0 755 aaPredicted RBP4.57□□□□□ -1.68
HTT-202ENST00000502820 PRRC1Q96M27 445 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 GNRHR2Q96P88 292 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 SLC35A5Q9BS91 424 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 TMPRSS5Q9H3S3 457 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 REEP4Q9H6H4 257 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 CTPS2Q9NRF8 586 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 GSN-AS1Q9NRJ2 163 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 SMCO4Q9NRQ5 59 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 ACSS1Q9NUB1 689 aaPredicted RBP4.57□□□□□ -1.68
HTT-202ENST00000502820 RYDENQ9NUL5 291 aaKnown RBP4.57□□□□□ -1.68
HTT-202ENST00000502820 RLIMQ9NVW2 624 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 DNAJC27Q9NZQ0 273 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 JKAMPQ9P055 326 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 CLEC2DQ9UHP7 191 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 METRNQ9UJH8 293 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 ZNF281Q9Y2X9 895 aa4.57□□□□□ -1.68
HTT-202ENST00000502820 TRAV20A0A0B4J274 112 aa4.56□□□□□ -1.68
HTT-202ENST00000502820 ANKRD20A5PA0PJZ0 165 aa4.56□□□□□ -1.68
HTT-202ENST00000502820 RNF222A6NCQ9 220 aa4.56□□□□□ -1.68
HTT-202ENST00000502820 MBD3L3A6NE82 208 aaPredicted RBP4.56□□□□□ -1.68
HTT-202ENST00000502820 C5orf52A6NGY3 159 aa4.56□□□□□ -1.68
HTT-202ENST00000502820 SLC22A31A6NKX4 558 aa4.56□□□□□ -1.68
HTT-202ENST00000502820 C17orf105B2RV13 164 aa4.56□□□□□ -1.68
HTT-202ENST00000502820 HRKO00198 91 aa4.56□□□□□ -1.68
HTT-202ENST00000502820 TGOLN2O43493 480 aa4.56□□□□□ -1.68
HTT-202ENST00000502820 BCL2L11O43521 198 aa4.56□□□□□ -1.68
HTT-202ENST00000502820 CPSF4O95639 269 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms