RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ZNF691Q5VV52 312 aa21.46■■□□□ 1.03
LSM6-202ENST00000502781 KCTD18Q6PI47 426 aaPredicted RBP21.46■■□□□ 1.03
LSM6-202ENST00000502781 RFLNBQ8N5W9 214 aa21.46■■□□□ 1.03
LSM6-202ENST00000502781 ZNF283Q8N7M2 679 aa21.46■■□□□ 1.03
LSM6-202ENST00000502781 WFDC11Q8NEX6 87 aa21.46■■□□□ 1.03
LSM6-202ENST00000502781 CMBLQ96DG6 245 aa21.46■■□□□ 1.03
LSM6-202ENST00000502781 ADI1Q9BV57 179 aa21.46■■□□□ 1.03
LSM6-202ENST00000502781 RAB1BQ9H0U4 201 aa21.46■■□□□ 1.03
LSM6-202ENST00000502781 VCXQ9H320 206 aa21.46■■□□□ 1.03
LSM6-202ENST00000502781 NIPAL2Q9H841 368 aa21.46■■□□□ 1.03
LSM6-202ENST00000502781 ITPR3Q14573 2671 aa21.45■■□□□ 1.02
LSM6-202ENST00000502781 C5orf63A6NC05 138 aa21.45■■□□□ 1.02
LSM6-202ENST00000502781 H0YJX3 145 aa21.45■■□□□ 1.02
LSM6-202ENST00000502781 HSD11B1P28845 292 aa21.45■■□□□ 1.02
LSM6-202ENST00000502781 MTNR1AP48039 350 aa21.45■■□□□ 1.02
LSM6-202ENST00000502781 CX3CR1P49238 355 aa21.45■■□□□ 1.02
LSM6-202ENST00000502781 HLXQ14774 488 aaPredicted RBP21.45■■□□□ 1.02
LSM6-202ENST00000502781 SNAI3Q3KNW1 292 aa21.45■■□□□ 1.02
LSM6-202ENST00000502781 LRRN1Q6UXK5 716 aa21.45■■□□□ 1.02
LSM6-202ENST00000502781 APH1BQ8WW43 257 aa21.45■■□□□ 1.02
LSM6-202ENST00000502781 CYGBQ8WWM9 190 aa21.45■■□□□ 1.02
LSM6-202ENST00000502781 OR8B4Q96RC9 309 aa21.45■■□□□ 1.02
LSM6-202ENST00000502781 PTTG3PQ9NZH4 202 aa21.45■■□□□ 1.02
LSM6-202ENST00000502781 CGGBP1Q9UFW8 167 aaPredicted RBP21.45■■□□□ 1.02
LSM6-202ENST00000502781 PURGQ9UJV8 347 aaKnown RBP21.45■■□□□ 1.02
LSM6-202ENST00000502781 SNTNA6NMZ2 147 aa21.44■■□□□ 1.02
LSM6-202ENST00000502781 H0YAE9 185 aa21.44■■□□□ 1.02
LSM6-202ENST00000502781 PHYHO14832 338 aa21.44■■□□□ 1.02
LSM6-202ENST00000502781 CLIC3O95833 236 aa21.44■■□□□ 1.02
LSM6-202ENST00000502781 OR2T7P0C7T2 308 aa21.44■■□□□ 1.02
LSM6-202ENST00000502781 SLC2A1P11166 492 aa21.44■■□□□ 1.02
LSM6-202ENST00000502781 CXCR4P61073 352 aa21.44■■□□□ 1.02
LSM6-202ENST00000502781 GK2Q14410 553 aaPredicted RBP21.44■■□□□ 1.02
LSM6-202ENST00000502781 ZNF322Q6U7Q0 402 aaPredicted RBP21.44■■□□□ 1.02
LSM6-202ENST00000502781 KRT77Q7Z794 578 aa21.44■■□□□ 1.02
LSM6-202ENST00000502781 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.44■■□□□ 1.02
LSM6-202ENST00000502781 ZNF679Q8IYX0 411 aa21.44■■□□□ 1.02
LSM6-202ENST00000502781 OR2T27Q8NH04 317 aa21.44■■□□□ 1.02
LSM6-202ENST00000502781 Q96MT0 163 aa21.44■■□□□ 1.02
LSM6-202ENST00000502781 LRP12Q9Y561 859 aa21.44■■□□□ 1.02
LSM6-202ENST00000502781 C17orf100A8MU93 164 aa21.43■■□□□ 1.02
LSM6-202ENST00000502781 J3QRE1 110 aa21.43■■□□□ 1.02
LSM6-202ENST00000502781 ZNF254O75437 659 aa21.43■■□□□ 1.02
LSM6-202ENST00000502781 WBP4O75554 376 aaKnown RBP21.43■■□□□ 1.02
LSM6-202ENST00000502781 ADH4P08319 380 aa21.43■■□□□ 1.02
LSM6-202ENST00000502781 NAT2P11245 290 aa21.43■■□□□ 1.02
LSM6-202ENST00000502781 DCTDP32321 178 aa21.43■■□□□ 1.02
LSM6-202ENST00000502781 LIPAP38571 399 aa21.43■■□□□ 1.02
LSM6-202ENST00000502781 CAPGP40121 348 aa21.43■■□□□ 1.02
LSM6-202ENST00000502781 ZNF121P58317 390 aaPredicted RBP21.43■■□□□ 1.02
LSM6-202ENST00000502781 IL18R1Q13478 541 aa21.43■■□□□ 1.02
LSM6-202ENST00000502781 SNX33Q8WV41 574 aa21.43■■□□□ 1.02
LSM6-202ENST00000502781 NEU4Q8WWR8 484 aaPredicted RBP21.43■■□□□ 1.02
LSM6-202ENST00000502781 MROQ9BYG7 248 aa21.43■■□□□ 1.02
LSM6-202ENST00000502781 CYSLTR2Q9NS75 346 aa21.43■■□□□ 1.02
LSM6-202ENST00000502781 ZNF670-ZNF695F2Z2N8 137 aa21.42■■□□□ 1.02
LSM6-202ENST00000502781 APOL3O95236 402 aa21.42■■□□□ 1.02
LSM6-202ENST00000502781 ATP6V1G2O95670 118 aa21.42■■□□□ 1.02
LSM6-202ENST00000502781 ISL1P61371 349 aa21.42■■□□□ 1.02
LSM6-202ENST00000502781 MALLQ13021 153 aa21.42■■□□□ 1.02
LSM6-202ENST00000502781 GTF3AQ92664 365 aaKnown RBP21.42■■□□□ 1.02
LSM6-202ENST00000502781 SPSB4Q96A44 273 aa21.42■■□□□ 1.02
LSM6-202ENST00000502781 RNFT2Q96EX2 444 aa21.42■■□□□ 1.02
LSM6-202ENST00000502781 TPK1Q9H3S4 243 aa21.42■■□□□ 1.02
LSM6-202ENST00000502781 SP140LQ9H930 580 aa21.42■■□□□ 1.02
LSM6-202ENST00000502781 NKIRAS2Q9NYR9 191 aa21.42■■□□□ 1.02
LSM6-202ENST00000502781 EXOGQ9Y2C4 368 aaKnown RBP21.42■■□□□ 1.02
LSM6-202ENST00000502781 MAP1AP78559 2803 aaPredicted RBP21.41■■□□□ 1.02
LSM6-202ENST00000502781 A0A1W2PQL4 384 aaPredicted RBP21.41■■□□□ 1.02
LSM6-202ENST00000502781 ZSCAN5BA6NJL1 495 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 TIMM8AO60220 97 aaPredicted RBP21.41■■□□□ 1.02
LSM6-202ENST00000502781 SSX4O60224 188 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 LY6HO94772 140 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 MT-ND5P03915 603 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 ERCC1P07992 297 aaPredicted RBP21.41■■□□□ 1.02
LSM6-202ENST00000502781 ATP6V1E1P36543 226 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 PSMA6P60900 246 aaKnown RBP21.41■■□□□ 1.02
LSM6-202ENST00000502781 ZNF92Q03936 586 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 ZNF91Q05481 1191 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 EGR3Q06889 387 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 GLYATL3Q5SZD4 288 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 ZNF684Q5T5D7 378 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 USP51Q70EK9 711 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 SSX6Q7RTT6 188 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 TGIF2LYQ8IUE0 185 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 OR52H1Q8NGJ2 320 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 TFAP2CQ92754 450 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 REPIN1Q9BWE0 567 aaKnown RBP21.41■■□□□ 1.02
LSM6-202ENST00000502781 ZNF319Q9P2F9 582 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 HSPE1-MOB4S4R3N1 261 aa21.41■■□□□ 1.02
LSM6-202ENST00000502781 IQCF6A8MYZ5 107 aa21.4■■□□□ 1.02
LSM6-202ENST00000502781 PSMD9O00233 223 aa21.4■■□□□ 1.02
LSM6-202ENST00000502781 XRCC2O43543 280 aa21.4■■□□□ 1.02
LSM6-202ENST00000502781 DBTP11182 482 aaKnown RBP21.4■■□□□ 1.02
LSM6-202ENST00000502781 ZNF81P51508 661 aa21.4■■□□□ 1.02
LSM6-202ENST00000502781 IL5RAQ01344 420 aa21.4■■□□□ 1.02
LSM6-202ENST00000502781 CLEC12BQ2HXU8 276 aa21.4■■□□□ 1.02
LSM6-202ENST00000502781 OR2T2Q6IF00 324 aa21.4■■□□□ 1.02
LSM6-202ENST00000502781 SETD9Q8NE22 299 aa21.4■■□□□ 1.02
LSM6-202ENST00000502781 OR2AE1Q8NHA4 323 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms