RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 OR5B2Q96R09 309 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 DHRS9Q9BPW9 319 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 SEC61A2Q9H9S3 476 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 RDH8Q9NYR8 311 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF224Q9NZL3 707 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 WNT16Q9UBV4 365 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF107Q9UII5 783 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-204ENST00000501271 VSIG4Q9Y279 399 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 SLC5A6Q9Y289 635 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 NCOA6Q14686 2063 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-204ENST00000501271 A0A1B0GTI1 187 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 hCG_1807616A0A1W2PRN6 198 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 OR14I1A6ND48 311 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 METTL21EPA6NDL7 271 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 B3GALNT1O75752 331 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 SNAPC5O75971 98 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 IGHG1P01857 330 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 NMBP08949 121 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 SLC2A1P11166 492 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 CXCL12P48061 93 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 PHF19Q5T6S3 580 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 OR52W1Q6IF63 320 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF529Q6P280 563 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 GSG1LQ6UXU4 331 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 SLC22A24Q8N4F4 322 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 STEAP2Q8NFT2 490 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 RBPMSQ93062 196 aaKnown RBP8.74□□□□□ -1.01
CLIP1-204ENST00000501271 SHDQ96IW2 340 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 SPACA5Q96QH8 159 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 RASL10BQ96S79 203 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 REG4Q9BYZ8 158 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 SDHAF3Q9NRP4 125 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 PISDQ9UG56 409 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 POLR1DQ9Y2S0 133 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 LOC100509620A0A075B734 347 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 RFPL4AA6NLU0 287 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF878C9JN71 531 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 RFPL4AL1F8VTS6 287 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 SIGLEC6O43699 453 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 GDF9O60383 454 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 DKK1O94907 266 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 BPNT1O95861 308 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 PNLIPP16233 465 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 GNB3P16520 340 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 SFTPDP35247 375 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 CDNFQ49AH0 187 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 RAB12Q6IQ22 244 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 WDSUB1Q8N9V3 476 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 CHST4Q8NCG5 386 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 ADPRHL1Q8NDY3 354 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 COQ8AQ8NI60 647 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 MYOZ1Q9NP98 299 aaPredicted RBP8.74□□□□□ -1.01
CLIP1-204ENST00000501271 RYDENQ9NUL5 291 aaKnown RBP8.74□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF319Q9P2F9 582 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 NUP50Q9UKX7 468 aa8.74□□□□□ -1.01
CLIP1-204ENST00000501271 TNRC6BQ9UPQ9 1833 aaKnown RBP8.73□□□□□ -1.01
CLIP1-204ENST00000501271 TEX51A0A1B0GUA7 166 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 HLA-AP01891 365 aaKnown RBP8.73□□□□□ -1.01
CLIP1-204ENST00000501271 RPA2P15927 270 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 ABOP16442 354 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 RAB3AP20336 220 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 MPGP29372 298 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 PRKXP51817 358 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 CAPZA1P52907 286 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 GMFBP60983 142 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 GK2Q14410 553 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-204ENST00000501271 RNASE10Q5GAN6 216 aaKnown RBP8.73□□□□□ -1.01
CLIP1-204ENST00000501271 PRAMEF20Q5VT98 475 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 AWAT2Q6E213 333 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 RGS7BPQ6MZT1 257 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-204ENST00000501271 OR8B12Q8NGG6 310 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 OR5M8Q8NGP6 311 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 SLC22A8Q8TCC7 542 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 SCARB1Q8WTV0 552 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 CLDN23Q96B33 292 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 SPACA9Q96E40 222 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-204ENST00000501271 CYYR1Q96J86 154 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 DMRTA2Q96SC8 542 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 UQCC2Q9BRT2 126 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 NICN1Q9BSH3 213 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 MFFQ9GZY8 342 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 SDHAF2Q9NX18 166 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 OCIAD1Q9NX40 245 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 SLC2A8Q9NY64 477 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 ASH2LQ9UBL3 628 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 MFSD2BA6NFX1 497 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 TMEM14DPA8MWL7 114 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 DISC1C4P0D8 188 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 CCSO14618 274 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 RER1O15258 196 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 ONECUT2O95948 504 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 CELA2AP08217 269 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 CD34P28906 385 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF93P35789 620 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-204ENST00000501271 DHPSP49366 369 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF121P58317 390 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-204ENST00000501271 CXADRP78310 365 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 MEF2DQ14814 521 aa8.73□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF660Q6AZW8 331 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms