RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 HIST2H3PS2Q5TEC6 136 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 PRAMEF8Q5VWM4 474 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 PRAMEF7Q5VXH5 474 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 DPY19L2P2Q6ZN68 376 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 OR5H2Q8NGV7 314 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 C4orf45Q96LM5 186 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 ZNF681Q96N22 645 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 CDC6Q99741 560 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 ALX4Q9H161 411 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 FAM212BQ9NTI7 297 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 CDRT15L2A8MXV6 281 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 APBB3O95704 486 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 FGF19O95750 216 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 CT62P0C5K7 136 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 FAM157CP0CG43 387 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 SLC2A1P11166 492 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 CXCR1P25024 350 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 KIR3DL2P43630 455 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 FXYD4P59646 89 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 RUNX2Q13950 521 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 SP6Q3SY56 376 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 PRR22Q8IZ63 422 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 PRSS35Q8N3Z0 413 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 SUMF1Q8NBK3 374 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 DMBX1Q8NFW5 382 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 OR5T1Q8NG75 326 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 CD99L2Q8TCZ2 262 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 NUDT9Q9BW91 350 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 SLC17A9Q9BYT1 436 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 EHFQ9NZC4 300 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 RAB22AQ9UL26 194 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 HCFC2Q9Y5Z7 792 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 WDR87Q6ZQQ6 2873 aa9.54□□□□□ -0.88
TRAPPC12-223ENST00000497597 TGIF2-C20orf24A0A0A6YYL0 155 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 NPIPB9F8W1W9 429 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 RAMP1O60894 148 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 KLF8O95600 359 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 PNPP00491 289 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 HEXAP06865 529 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 HEXBP07686 556 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 PET100P0DJ07 73 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 PPICP45877 212 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 TMEM33P57088 247 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 FBXW4P57775 412 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 RNF4P78317 190 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 MESP2Q0VG99 397 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 KHDC3LQ587J8 217 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 CLEC18BQ6UXF7 455 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 REC114Q7Z4M0 266 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 NECAP1Q8NC96 275 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 WFIKKN1Q96NZ8 548 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 GAL3ST4Q96RP7 486 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 LPAR4Q99677 370 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 RARRES2Q99969 163 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 CYTL1Q9NRR1 136 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 LUZP4Q9P127 313 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 Q9Y3F1 56 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 MAP1BP46821 2468 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 SNRNP200O75643 2136 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 A0A1B0GTQ1 180 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 MPZL1O95297 269 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 DUS4LO95620 317 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 ADH1CP00326 375 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 IFNA21P01568 189 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 IGFALSP35858 605 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 PPP1CCP36873 323 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 ALDH3B1P43353 468 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 TAS2R60P59551 318 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 GGNBP1Q5YKI7 109 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 OR4D6Q8NGJ1 314 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 WFIKKN2Q8TEU8 576 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 REEP6Q96HR9 211 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 PBDC1Q9BVG4 233 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 VN1R3Q9BXE9 311 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 IL17BQ9UHF5 180 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 RHBDD3Q9Y3P4 386 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 TCF20Q9UGU0 1960 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 NUDT19A8MXV4 375 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 H0YL77 283 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 LILRB5O75023 590 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 TIMP1P01033 207 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 THBS1P07996 1170 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 HCKP08631 526 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 ZNF823P16415 610 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 CDX1P47902 265 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 DHPSP49366 369 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 CSNK1EP49674 416 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 MFGE8Q08431 387 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 PRSS58Q8IYP2 241 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 TMEM123Q8N131 208 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 FNDC9Q8TBE3 224 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 ADAMTS17Q8TE56 1095 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 EDAQ92838 391 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 SRMSQ9H3Y6 488 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 PDE7BQ9NP56 450 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 CES1P1Q9UKY3 287 aa9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 MRPS2Q9Y399 296 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-223ENST00000497597 RFNGQ9Y644 331 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms