RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 OLFML2AQ68BL7 652 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 FRMPD2BQ6IN97 320 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 CRIP3Q6Q6R5 217 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 TMEM150AQ86TG1 271 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 CBLN2Q8IUK8 224 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 C9orf40Q8IXQ3 194 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 MCOLN2Q8IZK6 566 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 CYP4Z2PQ8N1L4 340 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 OR5AK3PQ8NH89 298 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 TAF15Q92804 592 aaKnown RBP eCLIP4.87□□□□□ -1.636e-6■□□□□ 11.2
BRCA1-224ENST00000497488 CDS1Q92903 461 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 SLC25A38Q96DW6 304 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 DYNLL2Q96FJ2 89 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 ZNF681Q96N22 645 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 SCGB3A2Q96PL1 93 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 NICN1Q9BSH3 213 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 CLEC7AQ9BXN2 247 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 AMBNQ9NP70 447 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 PLEKHJ1Q9NW61 149 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 APOBEC3BQ9UH17 382 aaKnown RBP4.87□□□□□ -1.63
BRCA1-224ENST00000497488 FBXL3Q9UKT7 428 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 ZNF256Q9Y2P7 627 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-224ENST00000497488 TBL2Q9Y4P3 447 aaKnown RBP4.87□□□□□ -1.63
BRCA1-224ENST00000497488 SPEF2Q9C093 1822 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 RTL9Q8NET4 1388 aa4.87□□□□□ -1.63
BRCA1-224ENST00000497488 SMIM23A6NLE4 172 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 SLCO1B7G3V0H7 640 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 G3V3Y1 287 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 RAD51CO43502 376 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 GATCO43716 136 aaKnown RBP4.86□□□□□ -1.63
BRCA1-224ENST00000497488 ICOSLGO75144 302 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 TBX6O95947 436 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-224ENST00000497488 GCGP01275 180 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 ARG1P05089 322 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 ATP6V1B2P21281 511 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 LOXP28300 417 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-224ENST00000497488 RGS6P49758 472 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 SUB1P53999 127 aaKnown RBP eCLIP4.86□□□□□ -1.63
BRCA1-224ENST00000497488 INHBCP55103 352 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 TAS2R39P59534 338 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 KRTAP10-2P60368 255 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 ERVPABLB-1P60509 514 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 RPL10AP62906 217 aaKnown RBP4.86□□□□□ -1.63
BRCA1-224ENST00000497488 ZNF146Q15072 292 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 CNPY1Q3B7I2 92 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 BSXQ3C1V8 233 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 TPTE2P1Q5T6R2 138 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 Q6ZN92 141 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 USP43Q70EL4 1123 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 TMEM135Q86UB9 458 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 HORMAD1Q86X24 394 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 RALGPS2Q86X27 583 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-224ENST00000497488 NUP37Q8NFH4 326 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 TTLQ8NG68 377 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 OR2L5Q8NG80 312 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 RNF133Q8WVZ7 376 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 IFT81Q8WYA0 676 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 WDR34Q96EX3 536 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 PGLYRP4Q96LB8 373 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 C1QTNF4Q9BXJ3 329 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 SRXN1Q9BYN0 137 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 PARLQ9H300 379 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 C6orf50Q9HD87 102 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 SLC39A1Q9NY26 324 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 KCNIP1Q9NZI2 227 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 PRODH2Q9UF12 536 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 BTNL2Q9UIR0 455 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 ABCB11O95342 1321 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 ADAMTSL1Q8N6G6 1762 aa4.86□□□□□ -1.63
BRCA1-224ENST00000497488 TTC3P53804 2025 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 EFCAB7A8K855 629 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 H7C2Y5 167 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 DFFAO00273 331 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 NME4O00746 187 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 ENSAO43768 121 aaKnown RBP4.85□□□□□ -1.63
BRCA1-224ENST00000497488 ZNF189O75820 626 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-224ENST00000497488 PSMG1O95456 288 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 SLC2A10O95528 541 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 NUDT3O95989 172 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 CTXN2P0C2S0 81 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 FOLR1P15328 257 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 ZNF7P17097 686 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-224ENST00000497488 GCKP35557 465 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 GDF5P43026 501 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 HCCSP53701 268 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 NDUFV3P56181 108 aaKnown RBP4.85□□□□□ -1.63
BRCA1-224ENST00000497488 ZNF92Q03936 586 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 BCL2L1Q07817 233 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 TFDP2Q14188 446 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 FLOT2Q14254 428 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 MICAQ29983 383 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 SLC36A2Q495M3 483 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 DNAL1Q4LDG9 190 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 FHL5Q5TD97 284 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 RESP18Q5W5W9 173 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 RWDD4Q6NW29 188 aaKnown RBP4.85□□□□□ -1.63
BRCA1-224ENST00000497488 ZFAND4Q86XD8 727 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 STX12Q86Y82 276 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 RDH10Q8IZV5 341 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms