RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 A0A0B4J2E0 115 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 A0A1B0GX12 115 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 TMEM129A0AVI4 362 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 ZNF726A6NNF4 738 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 H3BN98 237 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 M0R3H8 397 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 OR10H3O60404 316 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 ALX3O95076 343 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 SOX14O95416 240 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 TSPAN19P0C672 248 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 CPEP16870 476 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 HLA-DMAP28067 261 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 SDC2P34741 201 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 SRP14P37108 136 aaKnown RBP9.39□□□□□ -0.91
RNF220-217ENST00000496262 SLC9A3P48764 834 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 GNG2P59768 71 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 PPP3R1P63098 170 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 GALK2Q01415 458 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 PUDPQ08623 228 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 MFSD13AQ14CX5 517 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 SEC23BQ15437 767 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 DDI2Q5TDH0 399 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 PGBD2Q6P3X8 592 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 DEF8Q6ZN54 512 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 RANBP3LQ86VV4 465 aaPredicted RBP9.39□□□□□ -0.91
RNF220-217ENST00000496262 CCDC36Q8IYA8 594 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 LINC00471Q8N535 108 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 UBASH3BQ8TF42 649 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 NEU4Q8WWR8 484 aaPredicted RBP9.39□□□□□ -0.91
RNF220-217ENST00000496262 ZNF607Q96SK3 696 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 MRPL37Q9BZE1 423 aaKnown RBP9.39□□□□□ -0.91
RNF220-217ENST00000496262 C11orf54Q9H0W9 315 aaPredicted RBP9.39□□□□□ -0.91
RNF220-217ENST00000496262 POLR2J3Q9H1A7 115 aaKnown RBP9.39□□□□□ -0.91
RNF220-217ENST00000496262 MMP28Q9H239 520 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 MIXL1Q9H2W2 232 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 RNF121Q9H920 327 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 ABCB9Q9NP78 766 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 ISYNA1Q9NPH2 558 aa9.39□□□□□ -0.91
RNF220-217ENST00000496262 TXNL4BQ9NX01 149 aaKnown RBP9.39□□□□□ -0.91
RNF220-217ENST00000496262 FABP12A6NFH5 140 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 CPSF4LA6NMK7 179 aaKnown RBP9.38□□□□□ -0.91
RNF220-217ENST00000496262 NOTOA8MTQ0 251 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 M0R233 179 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 FFAR1O14842 300 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 LILRA1O75019 489 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 FZD7O75084 574 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 OR6A2O95222 327 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 IGFBP1P08833 259 aaPredicted RBP9.38□□□□□ -0.91
RNF220-217ENST00000496262 PATE4P0C8F1 98 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 MYL12AP19105 171 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 GIFP27352 417 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 ALDH3B1P43353 468 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 MAP2K3P46734 347 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 CSNK1A1P48729 337 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 BIDP55957 195 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 MSMPQ1L6U9 139 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 ALKBH6Q3KRA9 238 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 KLHL22Q53GT1 634 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 YIF1BQ5BJH7 314 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 SLC35F1Q5T1Q4 408 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 LIPKQ5VXJ0 399 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 TRIQKQ629K1 86 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 MZT2BQ6NZ67 158 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 UTS2BQ765I0 119 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 LRP11Q86VZ4 500 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 TCTE3Q8IZS6 198 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 TCEANCQ8N8B7 351 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 ADPRHL1Q8NDY3 354 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 GPR32P1Q8NGA4 272 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 OR52I1Q8NGK6 324 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 MRPL24Q96A35 216 aaKnown RBP9.38□□□□□ -0.91
RNF220-217ENST00000496262 SLC41A3Q96GZ6 507 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 DIRAS2Q96HU8 199 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 KCTD7Q96MP8 289 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 FOXB1Q99853 325 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 OR51B6Q9H340 312 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 B3GNT2Q9NY97 397 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 NUFIP1Q9UHK0 495 aaKnown RBP9.38□□□□□ -0.91
RNF220-217ENST00000496262 FBXO9Q9UK97 447 aaPredicted RBP9.38□□□□□ -0.91
RNF220-217ENST00000496262 EXOSC1Q9Y3B2 195 aaKnown RBP9.38□□□□□ -0.91
RNF220-217ENST00000496262 SPEF1Q9Y4P9 236 aa9.38□□□□□ -0.91
RNF220-217ENST00000496262 YLPM1P49750 1951 aaKnown RBP9.37□□□□□ -0.91
RNF220-217ENST00000496262 ANK2Q01484 3957 aa9.37□□□□□ -0.91
RNF220-217ENST00000496262 LOC102725191A0A1B0GVB3 256 aa9.37□□□□□ -0.91
RNF220-217ENST00000496262 A0A1W2PQL4 384 aaPredicted RBP9.37□□□□□ -0.91
RNF220-217ENST00000496262 PLPP3O14495 311 aa9.37□□□□□ -0.91
RNF220-217ENST00000496262 SYNGR3O43761 229 aa9.37□□□□□ -0.91
RNF220-217ENST00000496262 CH25HO95992 272 aa9.37□□□□□ -0.91
RNF220-217ENST00000496262 HLA-DQB1P01920 261 aa9.37□□□□□ -0.91
RNF220-217ENST00000496262 CLEC2LP0C7M8 214 aa9.37□□□□□ -0.91
RNF220-217ENST00000496262 ZNF14P17017 642 aaPredicted RBP9.37□□□□□ -0.91
RNF220-217ENST00000496262 PTBP1P26599 531 aaKnown RBP eCLIP9.37□□□□□ -0.91
RNF220-217ENST00000496262 ERP29P30040 261 aaKnown RBP9.37□□□□□ -0.91
RNF220-217ENST00000496262 ETV1P50549 477 aa9.37□□□□□ -0.91
RNF220-217ENST00000496262 WNT4P56705 351 aa9.37□□□□□ -0.91
RNF220-217ENST00000496262 ARPC4P59998 168 aa9.37□□□□□ -0.91
RNF220-217ENST00000496262 RAB1AP62820 205 aa9.37□□□□□ -0.91
RNF220-217ENST00000496262 RPS25P62851 125 aaKnown RBP9.37□□□□□ -0.91
RNF220-217ENST00000496262 MXD1Q05195 221 aa9.37□□□□□ -0.91
RNF220-217ENST00000496262 MELKQ14680 651 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms