RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 DVL1O14640 695 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 RER1O15258 196 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 OR10H3O60404 316 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 LHBP01229 141 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 IFI30P13284 250 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 CTLA4P16410 223 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 SLC9A3P48764 834 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 SELPLGQ14242 412 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 KRTAP27-1Q3LI81 207 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 AGKQ53H12 422 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 BEND6Q5SZJ8 279 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-209ENST00000495677 FAM122BQ7Z309 247 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 CALHM3Q86XJ0 350 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 GJC3Q8NFK1 279 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 OR4S1Q8NGB4 309 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 HDHD2Q9H0R4 259 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 RANBP3Q9H6Z4 567 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-209ENST00000495677 UFSP2Q9NUQ7 469 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 GRHPRQ9UBQ7 328 aa11.02□□□□□ -0.65
COL1A1-209ENST00000495677 XKRYO14609 159 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 GMDSO60547 372 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 CD14P08571 375 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 EEF1B2P24534 225 aaKnown RBP11.01□□□□□ -0.65
COL1A1-209ENST00000495677 IDH3AP50213 366 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 MTPNP58546 118 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 PRKCDQ05655 676 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 GK2Q14410 553 aaPredicted RBP11.01□□□□□ -0.65
COL1A1-209ENST00000495677 PRAMEF6Q5VXH4 476 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 TEX36Q5VZQ5 186 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 C1orf122Q6ZSJ8 110 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 DHDDSQ86SQ9 333 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 OAFQ86UD1 273 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 GLB1L2Q8IW92 636 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 PDZD9Q8IXQ8 264 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 RNF113BQ8IZP6 322 aaKnown RBP11.01□□□□□ -0.65
COL1A1-209ENST00000495677 OR51A7Q8NH64 312 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 OR10A6Q8NH74 314 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 TSPEARQ8WU66 669 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 PHF21AQ96BD5 680 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 PPA2Q9H2U2 334 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 RABEP2Q9H5N1 569 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 FOXJ3Q9UPW0 622 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 NDUFAF1Q9Y375 327 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 MAB21L2Q9Y586 359 aa11.01□□□□□ -0.65
COL1A1-209ENST00000495677 TRAV27A0A087WT01 109 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 H7C1C5 153 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 NPFFO15130 113 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 KHDRBS3O75525 346 aaKnown RBP11□□□□□ -0.65
COL1A1-209ENST00000495677 LCN6P62502 163 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 HOXA4Q00056 320 aaPredicted RBP11□□□□□ -0.65
COL1A1-209ENST00000495677 ACSM1Q08AH1 577 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 OR8B8Q15620 311 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 MESTQ5EB52 335 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 FOXB2Q5VYV0 432 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 PGM2L1Q6PCE3 622 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 CRIP3Q6Q6R5 217 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 FAM90A1Q86YD7 464 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 CMTM4Q8IZR5 234 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 GCSAMQ8N6F7 178 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 BEND2Q8NDZ0 799 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 WFDC9Q8NEX5 89 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 OR2T6Q8NHC8 308 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 C8orf46Q8TAG6 207 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 PPP1R35Q8TAP8 253 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 TNFRSF14Q92956 283 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 Q96M85 177 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 C7orf26Q96N11 449 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 EBF4Q9BQW3 602 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 SEMA6AQ9H2E6 1030 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 CENPHQ9H3R5 247 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 WDR76Q9H967 626 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 NMNAT1Q9HAN9 279 aaPredicted RBP11□□□□□ -0.65
COL1A1-209ENST00000495677 NOL12Q9UGY1 213 aaKnown RBP eCLIP11□□□□□ -0.65
COL1A1-209ENST00000495677 A4GNTQ9UNA3 340 aa11□□□□□ -0.65
COL1A1-209ENST00000495677 COA3Q9Y2R0 106 aaPredicted RBP11□□□□□ -0.65
COL1A1-209ENST00000495677 V9GYY5 206 aaPredicted RBP11□□□□□ -0.65
COL1A1-209ENST00000495677 SHOX2O60902 331 aaPredicted RBP10.99□□□□□ -0.65
COL1A1-209ENST00000495677 GYPAP02724 150 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 ACSM4P0C7M7 580 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 TNFRSF1BP20333 461 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 IFNA8P32881 189 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 OR1E2P47887 323 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 UBE2E1P51965 193 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 DBPQ10586 325 aaPredicted RBP10.99□□□□□ -0.65
COL1A1-209ENST00000495677 OR8G1Q15617 311 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 AANATQ16613 207 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 PGAP1Q75T13 922 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 KLHDC1Q8N7A1 406 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 Q8N7P7 452 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 PRRC1Q96M27 445 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 WWC2-AS2Q96NR7 200 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 FAM234AQ9H0X4 552 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 MEGF9Q9H1U4 602 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 VSX1Q9NZR4 365 aaPredicted RBP10.99□□□□□ -0.65
COL1A1-209ENST00000495677 SIGLEC9Q9Y336 463 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 ADAM18Q9Y3Q7 739 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 LHFPL6Q9Y693 200 aa10.99□□□□□ -0.65
COL1A1-209ENST00000495677 EFCAB9A8MZ26 197 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 SLC16A7O60669 478 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 PAHP00439 452 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms