RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	OR5M11	Q96RB7	305 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	C1QTNF5	Q9BXJ0	243 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	FAM206A	Q9NX38	181 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	OR52A1	Q9UKL2	312 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	GTF2A1L	Q9UNN4	478 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	GRIP1	Q9Y3R0	1128 aa		11.75	□□□□□ -0.53
APTX-231	ENST00000494973	HCFC1	P51610	2035 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	LOC100509620	A0A075B734	347 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973		A0A0U1RQV5	110 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	CLEC18A	A5D8T8	446 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	VSTM5	A8MXK1	200 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	OGG1	O15527	345 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	PLPP2	O43688	288 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	SRSF10	O75494	262 aa	Known RBP	11.74	□□□□□ -0.53
APTX-231	ENST00000494973	MTRF1	O75570	445 aa	Known RBP	11.74	□□□□□ -0.53
APTX-231	ENST00000494973	SERPINA3	P01011	423 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	LCAT	P04180	440 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	CPE	P16870	476 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	CD40	P25942	277 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	ARMCX4	Q5H9R4	360 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	CLEC18B	Q6UXF7	455 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	COLCA1	Q6ZS62	124 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	FAM57B	Q71RH2	274 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	GPR141	Q7Z602	305 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	ELMOD2	Q8IZ81	293 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	ZNF676	Q8N7Q3	588 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	CLEC18C	Q8NCF0	446 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	OR5AK2	Q8NH90	309 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	RPS4Y2	Q8TD47	263 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	ZC3HAV1L	Q96H79	300 aa	Known RBP	11.74	□□□□□ -0.53
APTX-231	ENST00000494973	PBOV1	Q9GZY1	135 aa		11.74	□□□□□ -0.53
APTX-231	ENST00000494973	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.74	□□□□□ -0.53
APTX-231	ENST00000494973	RALY	Q9UKM9	306 aa	Known RBP	11.74	□□□□□ -0.53
APTX-231	ENST00000494973	SMG1	Q96Q15	3661 aa	Known RBP	11.73	□□□□□ -0.53
APTX-231	ENST00000494973	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973		A0A1B0GVI7	797 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	MAGEB4	O15481	346 aa	Predicted RBP	11.73	□□□□□ -0.53
APTX-231	ENST00000494973	TBX1	O43435	398 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	ISG15	P05161	165 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	THBD	P07204	575 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	CD3E	P07766	207 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	DBH	P09172	617 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	ZNF35	P13682	527 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	IGFBP2	P18065	325 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	CEL	P19835	753 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	ACHE	P22303	614 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	GAL	P22466	123 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	MAPK3	P27361	379 aa	Predicted RBP	11.73	□□□□□ -0.53
APTX-231	ENST00000494973	GABRA5	P31644	462 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	CDSN	Q15517	529 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	YIF1B	Q5BJH7	314 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	WDR38	Q5JTN6	314 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	DMKN	Q6E0U4	476 aa	Predicted RBP	11.73	□□□□□ -0.53
APTX-231	ENST00000494973	ALKBH2	Q6NS38	261 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	FTMT	Q8N4E7	242 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	MS4A3	Q96HJ5	214 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	OPALIN	Q96PE5	141 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	C1QTNF6	Q9BXI9	259 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	G6PC2	Q9NQR9	355 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	NDUFB11	Q9NX14	153 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	NPAP1	Q9NZP6	1156 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	ST6GALNAC2	Q9UJ37	374 aa		11.73	□□□□□ -0.53
APTX-231	ENST00000494973	UBR5	O95071	2799 aa	Predicted RBP	11.72	□□□□□ -0.53
APTX-231	ENST00000494973	LOC390937	A0A1W2PQ73	354 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	DHRS7C	A6NNS2	312 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	SMPD2	O60906	423 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	INMT	O95050	263 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	ATE1	O95260	518 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	HLA-DPB1	P04440	258 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	CELA3B	P08861	270 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	SELE	P16581	610 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	PSMB10	P40306	273 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	ALDH3B2	P48448	385 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	MFGE8	Q08431	387 aa	Predicted RBP	11.72	□□□□□ -0.53
APTX-231	ENST00000494973	TST	Q16762	297 aa	Known RBP	11.72	□□□□□ -0.53
APTX-231	ENST00000494973	NCMAP	Q5T1S8	102 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	PAMR1	Q6UXH9	720 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	DOK3	Q7L591	496 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	PRSS45	Q7RTY3	260 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	COMMD2	Q86X83	199 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	PHC2	Q8IXK0	858 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.72	□□□□□ -0.53
APTX-231	ENST00000494973	NUP37	Q8NFH4	326 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	OR8B12	Q8NGG6	310 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	ABHD4	Q8TB40	342 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	GPR148	Q8TDV2	347 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	SLC7A6	Q92536	515 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	C10orf35	Q96D05	121 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	SPOCK3	Q9BQ16	436 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	BRD7	Q9NPI1	651 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	FRRS1L	Q9P0K9	344 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	KCNN3	Q9UGI6	736 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	HHLA2	Q9UM44	414 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	ZNF281	Q9Y2X9	895 aa		11.72	□□□□□ -0.53
APTX-231	ENST00000494973	OR4C45	A6NMZ5	311 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	PRSS44	E7EML9	344 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973		E9PI62	339 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	NOL3	O60936	208 aa	Known RBP	11.71	□□□□□ -0.53
APTX-231	ENST00000494973	ZFPL1	O95159	310 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	PNP	P00491	289 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms