RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ZDHHC11BP0C7U3 371 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 MAGP20916 626 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 GALP22466 123 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 CEACAM6P40199 344 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 NAA10P41227 235 aaPredicted RBP2.75□□□□□ -1.97
SMC4-224ENST00000494612 SRSF5Q13243 272 aaKnown RBP2.75□□□□□ -1.97
SMC4-224ENST00000494612 POU2AF1Q16633 256 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 TFDP3Q5H9I0 405 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 C12orf56Q8IXR9 622 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 CYB561D1Q8N8Q1 229 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 FBXL13Q8NEE6 735 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 OR10R2Q8NGX6 335 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 RAB3IL1Q8TBN0 382 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 PIBF1Q8WXW3 757 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 PANX1Q96RD7 426 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 SH3GL3Q99963 347 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 MRPL37Q9BZE1 423 aaKnown RBP2.75□□□□□ -1.97
SMC4-224ENST00000494612 ZNF629Q9UEG4 869 aaPredicted RBP2.75□□□□□ -1.97
SMC4-224ENST00000494612 SHPKQ9UHJ6 478 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 ST3GAL6Q9Y274 331 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 GOLT1BQ9Y3E0 138 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 NACAE9PAV3 2078 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 ATAD5Q96QE3 1844 aa2.75□□□□□ -1.97
SMC4-224ENST00000494612 SYNRGQ9UMZ2 1314 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 PLXNA1Q9UIW2 1896 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 IGKV2D-24A0A075B6R9 120 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 CDC7O00311 574 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 CASQ2O14958 399 aaPredicted RBP2.74□□□□□ -1.97
SMC4-224ENST00000494612 CLPXO76031 633 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 ASGR1P07306 291 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 ACSM4P0C7M7 580 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 MAB21L1Q13394 359 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 SNRNP35Q16560 246 aaKnown RBP2.74□□□□□ -1.97
SMC4-224ENST00000494612 METAP1DQ6UB28 335 aaPredicted RBP2.74□□□□□ -1.97
SMC4-224ENST00000494612 H2AFVQ71UI9 128 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 TMEM135Q86UB9 458 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 FAM86B1Q8N7N1 296 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 ACMSDQ8TDX5 336 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 ECHDC3Q96DC8 303 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 WFIKKN1Q96NZ8 548 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 NOX3Q9HBY0 568 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 PSG8Q9UQ74 426 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 MYH2Q9UKX2 1941 aa2.74□□□□□ -1.97
SMC4-224ENST00000494612 LRRC37A2A6NM11 1700 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 MN1Q10571 1320 aaPredicted RBP2.73□□□□□ -1.97
SMC4-224ENST00000494612 GLYATL1P3A0A0U1RQE8 302 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 INS-IGF2F8WCM5 200 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 H0YHG0 523 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 AGTP01019 485 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 FTH1P02794 183 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 ANXA8P13928 327 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 SSR4P51571 173 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 RND2P52198 227 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 SLC25A11Q02978 314 aaKnown RBP2.73□□□□□ -1.97
SMC4-224ENST00000494612 EBI3Q14213 229 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 GINS1Q14691 196 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 RGNQ15493 299 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 TMEM255AQ5JRV8 349 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 C1orf185Q5T7R7 199 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 ANXA8L1Q5VT79 327 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 RAET1LQ5VY80 246 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 ABHD13Q7L211 337 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 CMTM1Q8IZ96 169 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 PRELID2Q8N945 189 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 OR10G2Q8NGC3 310 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 FAM81AQ8TBF8 368 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 ELMO1Q92556 727 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 DUS3LQ96G46 650 aaKnown RBP2.73□□□□□ -1.97
SMC4-224ENST00000494612 TSNARE1Q96NA8 513 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 PORCNQ9H237 461 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 BEX1Q9HBH7 125 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 ZNF222Q9UK12 451 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 REV3LO60673 3130 aa2.73□□□□□ -1.97
SMC4-224ENST00000494612 MROH7-TTC4A0A0A0MT08 1334 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 TTC41PQ6P2S7 1318 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 WDR19Q8NEZ3 1342 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 ZNFX1Q9P2E3 1918 aaKnown RBP2.72□□□□□ -1.97
SMC4-224ENST00000494612 TRAV39A0A0B4J263 110 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 SERTM2A0A1B0GWG4 89 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 A0A1W2PP18 115 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 NCF1BA6NI72 391 aaPredicted RBP2.72□□□□□ -1.97
SMC4-224ENST00000494612 NCF1CA8MVU1 366 aaPredicted RBP2.72□□□□□ -1.97
SMC4-224ENST00000494612 TEX46H3BTG2 121 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 WRBO00258 174 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 MRPS12O15235 138 aaKnown RBP2.72□□□□□ -1.97
SMC4-224ENST00000494612 DNAJB6O75190 326 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 MED6O75586 246 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 SRP72O76094 671 aaKnown RBP2.72□□□□□ -1.97
SMC4-224ENST00000494612 FGF4P08620 206 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 CYBAP13498 195 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 PGAM1P18669 254 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 AQP2P41181 271 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 SYKP43405 635 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 RAP1AP62834 184 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 MXD1Q05195 221 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 RCAN2Q14206 197 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 STK11Q15831 433 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 ANKRD22Q5VYY1 191 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 CARD17Q5XLA6 110 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 LRRC66Q68CR7 880 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms