RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ALKBH6Q3KRA9 238 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 SLX4IPQ5VYV7 408 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 C12orf73Q69YU5 71 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 CLEC2AQ6UVW9 174 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 UNQ6126/PRO20091Q6UXV3 157 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 FBXW12Q6X9E4 464 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 DCXRQ7Z4W1 244 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 BIVMQ86UB2 503 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 CPOQ8IVL8 374 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 ICA1LQ8NDH6 482 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 BBS1Q8NFJ9 593 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 OR2AJ1Q8NGZ0 328 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 FAM168AQ92567 244 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 PITX2Q99697 317 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 CIB1Q99828 191 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 RHNO1Q9BSD3 238 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 OSBPL10Q9BXB5 764 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 C1QTNF5Q9BXJ0 243 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 GABARAPL3Q9BY60 117 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 MS4A5Q9H3V2 200 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 MYOZ1Q9NP98 299 aaPredicted RBP7.47□□□□□ -1.21
ITGB1-217ENST00000494395 TUBG2Q9NRH3 451 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 KRT84Q9NSB2 600 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 SLCO1C1Q9NYB5 712 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 NKIRAS2Q9NYR9 191 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 GRIP1Q9Y3R0 1128 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 U3KQE9 123 aa7.47□□□□□ -1.21
ITGB1-217ENST00000494395 A0A1W2PPW3 197 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 LOC390937A0A1W2PQ73 354 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 C5orf63A6NC05 138 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 ZSCAN5BA6NJL1 495 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 PRR23D1E9PI22 279 aaPredicted RBP7.46□□□□□ -1.22
ITGB1-217ENST00000494395 NDUFS8O00217 210 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 ZNF593O00488 134 aaPredicted RBP7.46□□□□□ -1.22
ITGB1-217ENST00000494395 PRKYO43930 277 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 RP2O75695 350 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 IGLV1-40P01703 118 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 HPXP02790 462 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 PRR23D2P0DMB1 279 aaPredicted RBP7.46□□□□□ -1.22
ITGB1-217ENST00000494395 DAOP14920 347 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 SLC25A16P16260 332 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 ZNF823P16415 610 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 PAICSP22234 425 aaKnown RBP7.46□□□□□ -1.22
ITGB1-217ENST00000494395 IGFBP5P24593 272 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 GCH1P30793 250 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 POLR2IP36954 125 aaKnown RBP7.46□□□□□ -1.22
ITGB1-217ENST00000494395 NR4A2P43354 598 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 MAGEB1P43366 347 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 PDLIM4P50479 330 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 LOXL1Q08397 574 aaPredicted RBP7.46□□□□□ -1.22
ITGB1-217ENST00000494395 ECH1Q13011 328 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 RIN1Q13671 783 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 NKPD1Q17RQ9 610 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 SLC35D3Q5M8T2 416 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 PLBD1Q6P4A8 553 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 TMEM154Q6P9G4 183 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 ARL9Q6T311 187 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 Q6ZR03 302 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 NAA40Q86UY6 237 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 ZNF786Q8N393 782 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 MAPK1IP1LQ8NDC0 245 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 OR6K6Q8NGW6 343 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 OR6N2Q8NGY6 317 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 APOBEC3DQ96AK3 386 aaPredicted RBP7.46□□□□□ -1.22
ITGB1-217ENST00000494395 HAVCR1Q96D42 359 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 SLAMF6Q96DU3 332 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 ZMYND19Q96E35 227 aaPredicted RBP7.46□□□□□ -1.22
ITGB1-217ENST00000494395 RAB3IPQ96QF0 476 aaPredicted RBP7.46□□□□□ -1.22
ITGB1-217ENST00000494395 INTS14Q96SY0 518 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 AMELYQ99218 206 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 CDADC1Q9BWV3 514 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 USE1Q9NZ43 259 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 PURGQ9UJV8 347 aaKnown RBP7.46□□□□□ -1.22
ITGB1-217ENST00000494395 ABCA1O95477 2261 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 ABCA2Q9BZC7 2435 aa7.46□□□□□ -1.22
ITGB1-217ENST00000494395 CSPG4Q6UVK1 2322 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 A0A1B0GWJ7 208 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 SAC3D1A6NKF1 404 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 ZNF878C9JN71 531 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 LYNX1G3V0Z9 82 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 M0R129 80 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 M0R135 149 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 EI24O14681 340 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 SELENOFO60613 162 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 LY6G6DO95868 133 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 IGHV1-46P01743 117 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 ALPLP05186 524 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 HEXAP06865 529 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 CD55P08174 381 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 SPARCP09486 303 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 H2AFB1P0C5Y9 115 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 H2AFB2P0C5Z0 115 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 LYNX1P0DP58 116 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 RAC2P15153 192 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 FSTP19883 344 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 SELENOVP59797 346 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 MRPS11P82912 194 aaKnown RBP7.45□□□□□ -1.22
ITGB1-217ENST00000494395 APOFQ13790 326 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 GGTLC2Q14390 218 aa7.45□□□□□ -1.22
ITGB1-217ENST00000494395 SNAPC1Q16533 368 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms