RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 A0A1W2PRB8 838 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 TMEM218A2RU14 115 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 ANKRD61A6NGH8 418 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 C5orf52A6NGY3 159 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 SLC22A20A6NK97 555 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 ANXA2P2A6NMY6 339 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 LGALS8O00214 317 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 CTDSPLO15194 276 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 GSTZ1O43708 216 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-234ENST00000493923 TBX19O60806 448 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 NDUFS6O75380 124 aaKnown RBP7.23□□□□□ -1.25
HDAC6-234ENST00000493923 OR2A4O95047 310 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 NTN1O95631 604 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 C1QCP02747 245 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 HIST1H2ABP04908 130 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 ALDOBP05062 364 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 THBDP07204 575 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 SPP1P10451 314 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 IFNGR1P15260 489 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 MGMTP16455 207 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 HOXB9P17482 250 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-234ENST00000493923 GPX2P18283 190 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 NPR2P20594 1047 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 PCGF2P35227 344 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 PMELP40967 661 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 MTNR1BP49286 362 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 PRR5P85299 388 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 ACSM1Q08AH1 577 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 MPPED2Q15777 294 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.23□□□□□ -1.25
HDAC6-234ENST00000493923 DEFB113Q30KQ7 82 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 NDUFAF6Q330K2 333 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 OR2B11Q5JQS5 317 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 NKAPLQ5M9Q1 402 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 C10orf91Q5T1B1 145 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 LIPKQ5VXJ0 399 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 HBMQ6B0K9 141 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 MFSD12Q6NUT3 480 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 ATRAIDQ6UW56 229 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 LRRN1Q6UXK5 716 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 Q71RC1 249 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-234ENST00000493923 HIST3H2AQ7L7L0 130 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 P4HA3Q7Z4N8 544 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 OAFQ86UD1 273 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 KRTCAP2Q8N6L1 136 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 BEST4Q8NFU0 473 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 OR52P1PQ8NH57 321 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 HIST1H2ACQ93077 130 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 MBD6Q96DN6 1003 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 C7orf34Q96L11 122 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 ZFP3Q96NJ6 502 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 OR2A7Q96R45 310 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 SSX3Q99909 188 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 TMEM185BQ9H7F4 350 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 CXorf36Q9H7Y0 433 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 Q9N2J8 555 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 AMBNQ9NP70 447 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 FGF20Q9NP95 211 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-234ENST00000493923 MRPS18AQ9NVS2 196 aaKnown RBP7.23□□□□□ -1.25
HDAC6-234ENST00000493923 MGAT4CQ9UBM8 478 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 FBXL3Q9UKT7 428 aa7.23□□□□□ -1.25
HDAC6-234ENST00000493923 SPIN1Q9Y657 262 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-234ENST00000493923 CENPVL1A0A0U1RR11 272 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 UBE2QL1A1L167 161 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 ALG1L2C9J202 215 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 LRRN3E7EW58 273 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 ZNF593O00488 134 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-234ENST00000493923 RFXANKO14593 260 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 MSTNO14793 375 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 EMC8O43402 210 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 CXCL13O43927 109 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 CREBL2O60519 120 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-234ENST00000493923 UBL3O95164 117 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 PLAUP00749 431 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 SBK2P0C263 348 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 RPS2P15880 293 aaKnown RBP7.22□□□□□ -1.25
HDAC6-234ENST00000493923 RPA2P15927 270 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 CXCL2P19875 107 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 CXCL3P19876 107 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 LAP3P28838 519 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 HOXC12P31275 282 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 BTCP35070 178 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 PTGFRP43088 359 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 MMP15P51511 669 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 HMGA2P52926 109 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 CRISP3P54108 245 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 MANFP55145 182 aaKnown RBP7.22□□□□□ -1.25
HDAC6-234ENST00000493923 SMIM11AP58511 58 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 SPIBQ01892 262 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 BDH1Q02338 343 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 SLC3A1Q07837 685 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 RBBP4Q09028 425 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 HNF4GQ14541 408 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 PEA15Q15121 130 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 PTGES3Q15185 160 aaKnown RBP7.22□□□□□ -1.25
HDAC6-234ENST00000493923 P2RY14Q15391 338 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 TOMM34Q15785 309 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-234ENST00000493923 SPANXN4Q5MJ08 99 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 C12orf73Q69YU5 71 aa7.22□□□□□ -1.25
HDAC6-234ENST00000493923 MOB3CQ70IA8 216 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms