RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 RAB31Q13636 194 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 ZNF79Q15937 498 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 UGT8Q16880 541 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 OR4F3Q6IEY1 312 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 ZNF793Q6ZN11 406 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 FCRLAQ7L513 359 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 FTMTQ8N4E7 242 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 EXD3Q8N9H8 876 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 ZNF555Q8NEP9 628 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 GPR151Q8TDV0 419 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 RGMAQ96B86 450 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 SMIM10Q96HG1 83 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 FER1L6-AS2Q96M78 137 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 C20orf85Q9H1P6 137 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 PRORYQ9H606 182 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 ZBTB20Q9HC78 741 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-222ENST00000493919 TNFRSF12AQ9NP84 129 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 YAE1D1Q9NRH1 226 aa10.39□□□□□ -0.75
BRCA1-222ENST00000493919 NUP210LQ5VU65 1888 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 OR2W5A6NFC9 320 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 VSTM2BA6NLU5 285 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 F6UZH7 168 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 PLPP1O14494 284 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 SMAD7O15105 426 aaKnown RBP10.38□□□□□ -0.75
BRCA1-222ENST00000493919 ARPC3O15145 178 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 CDC40O60508 579 aaKnown RBP eCLIP10.38□□□□□ -0.75
BRCA1-222ENST00000493919 GBAP04062 536 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 UBCP0CG48 685 aaKnown RBP10.38□□□□□ -0.75
BRCA1-222ENST00000493919 RPA2P15927 270 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 RAB6AP20340 208 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 HTR2AP28223 471 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 TIMP3P35625 211 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 CEACAM3P40198 252 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 CYB561P49447 251 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 MMP15P51511 669 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 HCCSP53701 268 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 UBE2V1Q13404 147 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 JOSD1Q15040 202 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-222ENST00000493919 TIMM50Q3ZCQ8 353 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 SAMD4BQ5PRF9 694 aaKnown RBP10.38□□□□□ -0.75
BRCA1-222ENST00000493919 MRGPREQ86SM8 312 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 CA13Q8N1Q1 262 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 KDM8Q8N371 416 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 PROKR2Q8NFJ6 384 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 OR4D6Q8NGJ1 314 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 OR5L1Q8NGL2 311 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 FBLIM1Q8WUP2 373 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 RGP1Q92546 391 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-222ENST00000493919 ACTR3CQ9C0K3 210 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-222ENST00000493919 DUSP21Q9H596 190 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 OAZ3Q9UMX2 235 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 ZFYVE26Q68DK2 2539 aa10.38□□□□□ -0.75
BRCA1-222ENST00000493919 TRAV25A0A0B4J276 109 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 C1QCP02747 245 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 HIST1H1TP22492 207 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-222ENST00000493919 GLP1RP43220 463 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 HOXC5Q00444 222 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 HMGCS1Q01581 520 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 MXD1Q05195 221 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 CRYZQ08257 329 aaKnown RBP10.37□□□□□ -0.75
BRCA1-222ENST00000493919 SPDYE7PQ495Y7 208 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 ARL13AQ5H913 290 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-222ENST00000493919 LIPKQ5VXJ0 399 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 OR4C11Q6IEV9 310 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 EIF5AL1Q6IS14 154 aaKnown RBP10.37□□□□□ -0.75
BRCA1-222ENST00000493919 H3F3CQ6NXT2 135 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 ACOT4Q8N9L9 421 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 OR13C5Q8NGS8 318 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 ADAMTS17Q8TE56 1095 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 C8orf44Q96CB5 159 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 RNFT2Q96EX2 444 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 C5orf30Q96GV9 206 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 VN1R1Q9GZP7 353 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 EML4Q9HC35 981 aaKnown RBP10.37□□□□□ -0.75
BRCA1-222ENST00000493919 DLL4Q9NR61 685 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 ADA2Q9NZK5 511 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 HSPB7Q9UBY9 170 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 FBXW2Q9UKT8 454 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 LHX6Q9UPM6 363 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 HIF3AQ9Y2N7 669 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 MMP24Q9Y5R2 645 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 HS3ST3B1Q9Y662 390 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 SCN2AQ99250 2005 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 PIEZO2Q9H5I5 2752 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 IFITM10A6NMD0 228 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 TMEM233B4DJY2 109 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 FAM227AF5H4B4 570 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 PEX12O00623 359 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 AZIN1O14977 448 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 SAP30O75446 220 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 SERPINE1P05121 402 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 CD5P06127 495 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 GKN3PP0CG01 181 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 GSTM3P21266 225 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 MMP11P24347 488 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 HTR2CP28335 458 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 RBM34P42696 430 aaKnown RBP10.37□□□□□ -0.75
BRCA1-222ENST00000493919 CRISP1P54107 249 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 LIM2P55344 173 aa10.37□□□□□ -0.75
BRCA1-222ENST00000493919 HERV-K104P63124 156 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms