RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 COPS4Q9BT78 406 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 TEX12Q9BXU0 123 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 NARFLQ9H6Q4 476 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 IL19Q9UHD0 177 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 TANC2Q9HCD6 1990 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.16■□□□□ 0.66
SNIP1-203ENST00000493916 A0A1B0GWJ7 208 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 ZNF878C9JN71 531 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 PRODHO43272 600 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 CIB2O75838 187 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 TNFRSF1AP19438 455 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 FASP25445 335 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 DAPP51397 102 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 LMO4P61968 165 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 GK2Q14410 553 aaPredicted RBP19.16■□□□□ 0.66
SNIP1-203ENST00000493916 PLBD1Q6P4A8 553 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 TIGD4Q8IY51 512 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 OR13G1Q8NGZ3 307 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 RAB1CQ92928 201 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 WIPI2Q9Y4P8 454 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 JMJD1CQ15652 2540 aa19.16■□□□□ 0.66
SNIP1-203ENST00000493916 B4DSR2 109 aa19.15■□□□□ 0.66
SNIP1-203ENST00000493916 SLC6A9P48067 706 aa19.15■□□□□ 0.66
SNIP1-203ENST00000493916 CRISP1P54107 249 aa19.15■□□□□ 0.66
SNIP1-203ENST00000493916 MVKQ03426 396 aa19.15■□□□□ 0.66
SNIP1-203ENST00000493916 AVPI1Q5T686 147 aa19.15■□□□□ 0.66
SNIP1-203ENST00000493916 ERI1Q8IV48 349 aaKnown RBP19.15■□□□□ 0.66
SNIP1-203ENST00000493916 OR6N2Q8NGY6 317 aa19.15■□□□□ 0.66
SNIP1-203ENST00000493916 PLEKHA8Q96JA3 519 aa19.15■□□□□ 0.66
SNIP1-203ENST00000493916 KCNJ15Q99712 375 aa19.15■□□□□ 0.66
SNIP1-203ENST00000493916 SLC30A2Q9BRI3 323 aa19.15■□□□□ 0.66
SNIP1-203ENST00000493916 SHARPINQ9H0F6 387 aa19.15■□□□□ 0.66
SNIP1-203ENST00000493916 GABARAPL1Q9H0R8 117 aa19.15■□□□□ 0.66
SNIP1-203ENST00000493916 OR51V1Q9H2C8 321 aa19.15■□□□□ 0.66
SNIP1-203ENST00000493916 G3V2T6 193 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 DVL1P1P54792 670 aaPredicted RBP19.14■□□□□ 0.65
SNIP1-203ENST00000493916 ESRRGP62508 458 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 GRB2P62993 217 aaKnown RBP19.14■□□□□ 0.65
SNIP1-203ENST00000493916 EIF2B1Q14232 305 aaKnown RBP19.14■□□□□ 0.65
SNIP1-203ENST00000493916 TAF13Q15543 124 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 SNAI3Q3KNW1 292 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 SLC35D3Q5M8T2 416 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 TMEM236Q5W0B7 351 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 SHFQ7M4L6 423 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 DPY19L4Q7Z388 723 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 CPOQ8IVL8 374 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 ZNF283Q8N7M2 679 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 RNF133Q8WVZ7 376 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 OR2V2Q96R30 315 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 BEX2Q9BXY8 128 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 TOR3AQ9H497 397 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 CENPMQ9NSP4 180 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 TREM2Q9NZC2 230 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 SVEP1Q4LDE5 3571 aa19.14■□□□□ 0.65
SNIP1-203ENST00000493916 FAM157CP0CG43 387 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 SLC2A5P22732 501 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 SLC15A1P46059 708 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 FAM120AOSQ5T036 256 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 CCDC121Q6ZUS5 278 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 PGAP1Q75T13 922 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 RHOUQ7L0Q8 258 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 MRPL21Q7Z2W9 205 aaKnown RBP19.13■□□□□ 0.65
SNIP1-203ENST00000493916 ZDHHC13Q8IUH4 622 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 BHLHE23Q8NDY6 225 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 ITLN1Q8WWA0 313 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 ZMYND19Q96E35 227 aaPredicted RBP19.13■□□□□ 0.65
SNIP1-203ENST00000493916 ZNF665Q9H7R5 613 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 KRT84Q9NSB2 600 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 TMEM106BQ9NUM4 274 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 MALRD1Q5VYJ5 2156 aa19.13■□□□□ 0.65
SNIP1-203ENST00000493916 FAM157AC9JC47 383 aa19.12■□□□□ 0.65
SNIP1-203ENST00000493916 MLNRO43193 412 aa19.12■□□□□ 0.65
SNIP1-203ENST00000493916 HNF1AP20823 631 aa19.12■□□□□ 0.65
SNIP1-203ENST00000493916 KDM4DQ6B0I6 523 aa19.12■□□□□ 0.65
SNIP1-203ENST00000493916 PEG10Q86TG7 708 aaKnown RBP19.12■□□□□ 0.65
SNIP1-203ENST00000493916 BBS1Q8NFJ9 593 aa19.12■□□□□ 0.65
SNIP1-203ENST00000493916 OR10AD1Q8NGE0 317 aa19.12■□□□□ 0.65
SNIP1-203ENST00000493916 LRTOMTQ8WZ04 291 aa19.12■□□□□ 0.65
SNIP1-203ENST00000493916 RAB39BQ96DA2 213 aa19.12■□□□□ 0.65
SNIP1-203ENST00000493916 MEGF10Q96KG7 1140 aa19.12■□□□□ 0.65
SNIP1-203ENST00000493916 ABHD6Q9BV23 337 aa19.12■□□□□ 0.65
SNIP1-203ENST00000493916 OPA3Q9H6K4 179 aa19.12■□□□□ 0.65
SNIP1-203ENST00000493916 TMEM100Q9NV29 134 aa19.12■□□□□ 0.65
SNIP1-203ENST00000493916 KIAA1324LA8MWY0 1029 aaPredicted RBP19.11■□□□□ 0.65
SNIP1-203ENST00000493916 IGHV2-5P01817 119 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 MSMBP08118 114 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 ANOS1P23352 680 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 PRKXP51817 358 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 ZNF92Q03936 586 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 PTGES3Q15185 160 aaKnown RBP19.11■□□□□ 0.65
SNIP1-203ENST00000493916 SNAPC1Q16533 368 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 KLHL12Q53G59 568 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 GLYATL3Q5SZD4 288 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 SPATC1Q76KD6 591 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 CXXC5Q7LFL8 322 aaKnown RBP19.11■□□□□ 0.65
SNIP1-203ENST00000493916 AMIGO2Q86SJ2 522 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 GLCCI1Q86VQ1 547 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 ZNF454Q8N9F8 522 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 OTOSQ8NHW6 89 aa19.11■□□□□ 0.65
SNIP1-203ENST00000493916 REPIN1Q9BWE0 567 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms