RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RHBDD1Q8TEB9 315 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 HAVCR1Q96D42 359 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 SFXN2Q96NB2 322 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 MS4A7Q9GZW8 240 aaPredicted RBP12.26□□□□□ -0.45
VCP-207ENST00000493886 RDH8Q9NYR8 311 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 PIPOXQ9P0Z9 390 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 MYEF2Q9P2K5 600 aaKnown RBP12.26□□□□□ -0.45
VCP-207ENST00000493886 KLHL13Q9P2N7 655 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 MAB21L2Q9Y586 359 aa12.26□□□□□ -0.45
VCP-207ENST00000493886 NSG1A0A0A6YYJ2 146 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 A0A1B0GUH1 482 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 A0A1W2PPL8 197 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 ANKRD20A5PA0PJZ0 165 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 ARPC5O15511 151 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 RAB40ALP0C0E4 278 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 ADH6P28332 368 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 SFTPDP35247 375 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 MPLP40238 635 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 RAG2P55895 527 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 AANATQ16613 207 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 ALKAL2Q6UX46 152 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 GLDNQ6ZMI3 551 aaPredicted RBP12.25□□□□□ -0.45
VCP-207ENST00000493886 NDUFAF7Q7L592 441 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 ST7LQ8TDW4 575 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 SLC25A43Q8WUT9 341 aaPredicted RBP12.25□□□□□ -0.45
VCP-207ENST00000493886 RAB40AQ8WXH6 277 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 PTTG3PQ9NZH4 202 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 AKAP7Q9P0M2 348 aaPredicted RBP12.25□□□□□ -0.45
VCP-207ENST00000493886 FBXL3Q9UKT7 428 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 ETV7Q9Y603 341 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 FRYLO94915 3013 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 L7N2F9 121 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 CREBL2O60519 120 aaPredicted RBP12.25□□□□□ -0.45
VCP-207ENST00000493886 SRSF10O75494 262 aaKnown RBP12.25□□□□□ -0.45
VCP-207ENST00000493886 AQP8O94778 261 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 TGM6O95932 706 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 SSR4P51571 173 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 TMEM176BQ3YBM2 270 aaPredicted RBP12.25□□□□□ -0.45
VCP-207ENST00000493886 MIB2Q96AX9 1013 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 MRPL13Q9BYD1 178 aaKnown RBP12.25□□□□□ -0.45
VCP-207ENST00000493886 ARRDC1-AS1Q9H2J1 176 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 ZNF160Q9HCG1 818 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 NPTNQ9Y639 398 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 R4GMQ9 66 aa12.25□□□□□ -0.45
VCP-207ENST00000493886 ACOT7O00154 380 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 RD3LP0DJH9 198 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 VSIG10L2P0DP72 767 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 CCL3P10147 92 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 GPAT4Q86UL3 456 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 ZNF227Q86WZ6 799 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 OR4C16Q8NGL9 310 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 ZBTB8AQ96BR9 441 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 RIMS4Q9H426 269 aaPredicted RBP12.24□□□□□ -0.45
VCP-207ENST00000493886 CHMP1AQ9HD42 196 aaPredicted RBP12.24□□□□□ -0.45
VCP-207ENST00000493886 STEAP1Q9UHE8 339 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 DHDHQ9UQ10 334 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 EMC9Q9Y3B6 208 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 FXYD6-FXYD2A0A087WZ82 144 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 ARGFXA6NJG6 315 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 ZNF814B7Z6K7 855 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 EIF1BO60739 113 aaKnown RBP12.24□□□□□ -0.45
VCP-207ENST00000493886 ZNF883P0CG24 379 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 DCAF12Q5T6F0 453 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 SLC16A13Q7RTY0 426 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 RPS19BP1Q86WX3 136 aaKnown RBP12.24□□□□□ -0.45
VCP-207ENST00000493886 C11orf40Q8WZ69 217 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 ANGPTL4Q9BY76 406 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 FXYD6Q9H0Q3 95 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 PLEKHA1Q9HB21 404 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 NPDC1Q9NQX5 325 aaPredicted RBP12.24□□□□□ -0.45
VCP-207ENST00000493886 HDGFL3Q9Y3E1 203 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 M0R296 226 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 MASP2O00187 686 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 TRAF3IP2O43734 574 aaPredicted RBP12.24□□□□□ -0.45
VCP-207ENST00000493886 STK17BO94768 372 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 FKBP2P26885 142 aaKnown RBP12.24□□□□□ -0.45
VCP-207ENST00000493886 CLLU1Q5K131 121 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 THEM4Q5T1C6 240 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 TMEM225Q6GV28 225 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 PLPP7Q8NBV4 271 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 OR10H5Q8NGA6 315 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 COQ8AQ8NI60 647 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 ASB5Q8WWX0 329 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 PAPOLGQ9BWT3 736 aaKnown RBP12.24□□□□□ -0.45
VCP-207ENST00000493886 GSX2Q9BZM3 304 aa12.24□□□□□ -0.45
VCP-207ENST00000493886 DMDP11532 3685 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 TRAV18A0A075B6X5 111 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 A0A087WZY1 265 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 PRAF2O60831 178 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 PLATP00750 562 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 CSRP1P21291 193 aaKnown RBP12.23□□□□□ -0.45
VCP-207ENST00000493886 CLRN1P58418 232 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 ASPHD2Q6ICH7 369 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 DEGS2Q6QHC5 323 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 GTPBP8Q8N3Z3 284 aaPredicted RBP12.23□□□□□ -0.45
VCP-207ENST00000493886 TMEM156Q8N614 296 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 PAQR8Q8TEZ7 354 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 SLC25A44Q96H78 314 aaPredicted RBP12.23□□□□□ -0.45
VCP-207ENST00000493886 CXorf58Q96LI9 332 aa12.23□□□□□ -0.45
VCP-207ENST00000493886 VRK1Q99986 396 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms