RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 MALLQ13021 153 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 DAG1Q14118 895 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 ADIPOQQ15848 244 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 PABPC1L2AQ5JQF8 200 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 SLC18B1Q6NT16 456 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 UGT2A3Q6UWM9 527 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 DNM1P46Q6ZS02 220 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 TUBA1AQ71U36 451 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 EGFL6Q8IUX8 553 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 TIGD4Q8IY51 512 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 LRRC18Q8N456 261 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 PRR18Q8N4B5 295 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 CYB561A3Q8NBI2 242 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 SLC30A7Q8NEW0 376 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 SDR9C7Q8NEX9 313 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 KBTBD8Q8NFY9 601 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 NEUROG1Q92886 237 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 DCLRE1CQ96SD1 692 aaKnown RBP5.78□□□□□ -1.48
VPS52-219ENST00000493379 TEAD3Q99594 435 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 PITX2Q99697 317 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 DOK1Q99704 481 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 C9orf16Q9BUW7 83 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 HCAR1Q9BXC0 346 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 SEMA6AQ9H2E6 1030 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 PLK3Q9H4B4 646 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 HINT3Q9NQE9 182 aaKnown RBP5.78□□□□□ -1.48
VPS52-219ENST00000493379 RPRD1BQ9NQG5 326 aaKnown RBP5.78□□□□□ -1.48
VPS52-219ENST00000493379 CA10Q9NS85 328 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 KRT84Q9NSB2 600 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 CBLN4Q9NTU7 201 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 DDX28Q9NUL7 540 aaKnown RBP5.78□□□□□ -1.48
VPS52-219ENST00000493379 NDRG4Q9ULP0 352 aaKnown RBP5.78□□□□□ -1.48
VPS52-219ENST00000493379 LHFPL6Q9Y693 200 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 ARID1AO14497 2285 aa5.78□□□□□ -1.48
VPS52-219ENST00000493379 USF3Q68DE3 2245 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 IQCMA0A1B0GVH7 501 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 A0A1B0GWJ7 208 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 TRIM64A6NGJ6 449 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 TRIM64BA6NI03 449 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 B9A039 149 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 PRR23D1E9PI22 279 aaPredicted RBP5.77□□□□□ -1.49
VPS52-219ENST00000493379 ATP6V1G2-DDX39BF2Z307 99 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 H7C417 338 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 EI24O14681 340 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 RER1O15258 196 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 SGCEO43556 437 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 PRR23D2P0DMB1 279 aaPredicted RBP5.77□□□□□ -1.49
VPS52-219ENST00000493379 ZNF3P17036 446 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 GABRB1P18505 474 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 IGFBP5P24593 272 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 STOMP27105 288 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 FMO3P31513 532 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 SERPINF1P36955 418 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 RAD52P43351 418 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 SNRPGP62308 76 aaKnown RBP5.77□□□□□ -1.49
VPS52-219ENST00000493379 ELF3P78545 371 aaPredicted RBP5.77□□□□□ -1.49
VPS52-219ENST00000493379 IL13RA1P78552 427 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 SPOCK1Q08629 439 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 TMED1Q13445 227 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 GGTLC2Q14390 218 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 RAB35Q15286 201 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 AGAP6Q5VW22 663 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 NXNL2Q5VZ03 156 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 TMEM236Q5W0B7 351 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 SLC22A25Q6T423 547 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 ZBTB49Q6ZSB9 765 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 KRT74Q7RTS7 529 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 CPOQ8IVL8 374 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 MUC15Q8N387 334 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 PAQR4Q8N4S7 273 aaPredicted RBP5.77□□□□□ -1.49
VPS52-219ENST00000493379 CBR4Q8N4T8 237 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 IQCF1Q8N6M8 205 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 PACRGLQ8N7B6 248 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 ZBTB34Q8NCN2 500 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 OR10S1Q8NGN2 331 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 OR8J1Q8NGP2 316 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 ST7LQ8TDW4 575 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 HTRA1Q92743 480 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 ITFG2Q969R8 447 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 MRPL24Q96A35 216 aaKnown RBP5.77□□□□□ -1.49
VPS52-219ENST00000493379 MARS2Q96GW9 593 aaKnown RBP5.77□□□□□ -1.49
VPS52-219ENST00000493379 COQ7Q99807 217 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 SYT3Q9BQG1 590 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 C1QTNF5Q9BXJ0 243 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 TEX12Q9BXU0 123 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 BCL2L14Q9BZR8 327 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 HDHD2Q9H0R4 259 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 DCLRE1BQ9H816 532 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 CCNB1IP1Q9NPC3 277 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 FAIMQ9NVQ4 179 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 SCOCQ9UIL1 159 aa5.77□□□□□ -1.49
VPS52-219ENST00000493379 A0A1W2PPL8 197 aa5.76□□□□□ -1.49
VPS52-219ENST00000493379 CCDC182A6NF36 153 aa5.76□□□□□ -1.49
VPS52-219ENST00000493379 H0YJX3 145 aa5.76□□□□□ -1.49
VPS52-219ENST00000493379 ZNF593O00488 134 aaPredicted RBP5.76□□□□□ -1.49
VPS52-219ENST00000493379 PRKYO43930 277 aa5.76□□□□□ -1.49
VPS52-219ENST00000493379 IGHV3-13P01766 116 aa5.76□□□□□ -1.49
VPS52-219ENST00000493379 ADH4P08319 380 aa5.76□□□□□ -1.49
VPS52-219ENST00000493379 CLUP10909 449 aa5.76□□□□□ -1.49
VPS52-219ENST00000493379 PSKH1P11801 424 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms