RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 A0A1W2PPZ6 126 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 IL18BPO95998 194 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 CSF3P09919 207 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 GLI4P10075 376 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF32P17041 273 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 GALP22466 123 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 HSD11B1P28845 292 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 CEACAM8P31997 349 aaPredicted RBP12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 GRB2P62993 217 aaKnown RBP12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 TGFBR3Q03167 851 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 SLC36A2Q495M3 483 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 ELFN2Q5R3F8 820 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 ANKRD16Q6P6B7 361 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 STARD4Q96DR4 205 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF486Q96H40 463 aaPredicted RBP12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 HDHD5Q9BXW7 423 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 SLC22A4Q9H015 551 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF221Q9UK13 617 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 TIMM10BQ9Y5J6 103 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 R4GMQ9 66 aa12.33□□□□□ -0.44
PDZRN3-210ENST00000492909 TMEM269A0A1B0GVZ9 245 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 SGCEO43556 437 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 SRSF10O75494 262 aaKnown RBP12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 RGS9O75916 674 aaPredicted RBP12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 ZFPL1O95159 310 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 PNPP00491 289 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 CGAP01215 116 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 MMP16P51512 607 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 CCR9P51686 369 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 RAB35Q15286 201 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 CCDC92Q53HC0 331 aaPredicted RBP12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 ST6GALNAC3Q8NDV1 305 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 OR1K1Q8NGR3 316 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 OR6F1Q8NGZ6 308 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 OR5AK2Q8NH90 309 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 C4orf45Q96LM5 186 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 SFXN3Q9BWM7 321 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 COMMD4Q9H0A8 199 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 HDHD2Q9H0R4 259 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 NEK6Q9HC98 313 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 GTF2A1LQ9UNN4 478 aa12.32□□□□□ -0.44
PDZRN3-210ENST00000492909 TMEM212A6NML5 194 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 OR4C45A6NMZ5 311 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 GABRPO00591 440 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 CASKO14936 926 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 DOK2O60496 412 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 SERPINA3P01011 423 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 MMP7P09237 267 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 PATE4P0C8F1 98 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 TRAPPC2P0DI81 140 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 TRAPPC2BP0DI82 140 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 IGHV1-2P23083 117 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 CTSSP25774 331 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 NR4A2P43354 598 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 TLE1Q04724 770 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 MFGE8Q08431 387 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 PMPCAQ10713 525 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 ECH1Q13011 328 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 TAB1Q15750 504 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 PYDC2Q56P42 97 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 WDR38Q5JTN6 314 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 METAP1DQ6UB28 335 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 CATSPERDQ86XM0 798 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 PRSS35Q8N3Z0 413 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 FGFBP3Q8TAT2 258 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 SOSTQ9BQB4 213 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 OR2H1Q9GZK4 316 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 RNF121Q9H920 327 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF224Q9NZL3 707 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 SH3BGRL2Q9UJC5 107 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF281Q9Y2X9 895 aa12.31□□□□□ -0.44
PDZRN3-210ENST00000492909 PYCARD-AS1I3L0S3 204 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 CD8BP10966 210 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 PTBP1P26599 531 aaKnown RBP eCLIP12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 DDOSTP39656 456 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 KIR3DL2P43630 455 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 PRKXP51817 358 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 PSMA6P60900 246 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 PSG4Q00888 419 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 GALK2Q01415 458 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 YIF1BQ5BJH7 314 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 ATAD3CQ5T2N8 411 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF774Q6NX45 483 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 TMEM53Q6P2H8 277 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 DPPA2Q7Z7J5 298 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 RDH10Q8IZV5 341 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF676Q8N7Q3 588 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 ZNF610Q8N9Z0 462 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 ABHD4Q8TB40 342 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 BCL2L2Q92843 193 aaPredicted RBP12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 DCLRE1CQ96SD1 692 aaKnown RBP12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 KCNJ15Q99712 375 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 C11orf54Q9H0W9 315 aaPredicted RBP12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 OR52A1Q9UKL2 312 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 MEIOCA2RUB1 952 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 SMIM30A4D0T7 59 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 HMX3A6NHT5 357 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 SYNGR3O43761 229 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 SC5DO75845 299 aa12.3□□□□□ -0.44
PDZRN3-210ENST00000492909 HLA-DQB1P01920 261 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms