RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 KRT16P08779 473 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 TACSTD2P09758 323 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 PGA4P0DJD7 388 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 PGA3P0DJD8 388 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 PGA5P0DJD9 388 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 PSMC3P17980 439 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 GABRG2P18507 467 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 SRMP19623 302 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 IL32P24001 234 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 RAB7AP51149 207 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF33AQ06730 810 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 LOXL1Q08397 574 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 SLC39A6Q13433 755 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 ART3Q13508 389 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 KIR2DS1Q14954 304 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 STK11Q15831 433 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 HADHQ16836 314 aaKnown RBP1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 ORMDL2Q53FV1 153 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 H3F3CQ6NXT2 135 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 WDR82Q6UXN9 313 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 WDR86Q86TI4 376 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 RIMKLAQ8IXN7 391 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 VKORC1L1Q8N0U8 176 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF321PQ8N8H1 164 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 INO80EQ8NBZ0 244 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR11H7Q8NGC8 314 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR10W1Q8NGF6 305 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR5AR1Q8NGP9 310 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 CA5BP1Q8WTZ4 195 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 RGP1Q92546 391 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 NAT6Q93015 286 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 APH1AQ96BI3 265 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 FOPNLQ96NB1 174 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 CAMK2N2Q96S95 79 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 TIMM17AQ99595 171 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 IL22Q9GZX6 179 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 OR2AG1Q9H205 316 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 RGCCQ9H4X1 137 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 TDRD3Q9H7E2 651 aaKnown RBP1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 MRM3Q9HC36 420 aaKnown RBP1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 HMG20AQ9NP66 347 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 PRSS16Q9NQE7 514 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNRD1Q9P1U0 126 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 CHTOPQ9Y3Y2 248 aaKnown RBP1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 ADAMTS13Q76LX8 1427 aa1.64□□□□□ -2.15
HMGB1P30-201ENST00000492455 TUBGCP6Q96RT7 1819 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 TSPOAP1O95153 1857 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 PALLDQ8WX93 1383 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 IGHV3OR16-9A0A0B4J2B5 98 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 IGKV1-8A0A0C4DH67 115 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 TMEM223A0PJW6 202 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 ANKRD65E5RJM6 399 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 H0YC42 278 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 CDC40O60508 579 aaKnown RBP eCLIP1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 NMT2O60551 498 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 SEMA3DO95025 777 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 FARS2O95363 451 aaKnown RBP1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 TDP2O95551 362 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 CD37P11049 281 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 CPN2P22792 545 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 DTYMKP23919 212 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 PFN2P35080 140 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 PEX19P40855 299 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 PMELP40967 661 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 GPR1P46091 355 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 SERPINB8P50452 374 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 CDKN2DP55273 166 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 RPS23P62266 143 aaKnown RBP1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 DNAJC3Q13217 504 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF266Q14584 549 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 SMUG1Q53HV7 270 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 GCSAMLQ5JQS6 135 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 FAM78AQ5JUQ0 283 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 ADNP2Q6IQ32 1131 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 PRMT9Q6P2P2 845 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 ULK3Q6PHR2 472 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 LINC00523Q86TU6 105 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 NKAIN4Q8IVV8 208 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 MYOCDQ8IZQ8 938 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 TRAM1L1Q8N609 369 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 SNX31Q8N9S9 440 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 ESR2Q92731 530 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 RAB1CQ92928 201 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 PTX4Q96A99 478 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 SGTBQ96EQ0 304 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 BTN2A3PQ96KV6 586 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 CSPG4P5Q96PW8 444 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 UQCC2Q9BRT2 126 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 NDFIP1Q9BT67 221 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 CALN1Q9BXU9 219 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 SAMD10Q9BYL1 202 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 DEFB129Q9H1M3 183 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 CLSTN2Q9H4D0 955 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 CD209Q9NNX6 404 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 MED4Q9NPJ6 270 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZC4H2Q9NQZ6 224 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 CHRAC1Q9NRG0 131 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 ZNF355PQ9NSJ1 428 aa1.63□□□□□ -2.15
HMGB1P30-201ENST00000492455 SLC17A7Q9P2U7 560 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms