RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 RP1L1Q8IWN7 2480 aaPredicted RBP2.22□□□□□ -2.05
VTA1-204ENST00000491881 IGLV2-18A0A075B6J9 118 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 TRAV19A0A0A6YYK7 116 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 A0A0U1RQV1 116 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 COLCA2A8K830 154 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 BPY2O14599 106 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 RCBTB2O95199 551 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 FGFR1OPO95684 399 aaKnown RBP2.22□□□□□ -2.05
VTA1-204ENST00000491881 POLR2MP0CAP2 368 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 BCKDHBP21953 392 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 PITPNAQ00169 270 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 CUL2Q13617 745 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 AVPI1Q5T686 147 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 HMGN2P46Q86SG4 172 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 LUZP2Q86TE4 346 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 WDFY1Q8IWB7 410 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 COX18Q8N8Q8 333 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 TTC29Q8NA56 475 aaPredicted RBP2.22□□□□□ -2.05
VTA1-204ENST00000491881 OR4K5Q8NGD3 323 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 OR10AD1Q8NGE0 317 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 OR52E2Q8NGJ4 325 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 OR5K2Q8NHB8 316 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 OR51E1Q8TCB6 317 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 DEDD2Q8WXF8 326 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 PTX4Q96A99 478 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 NEURL3Q96EH8 262 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 XPO6Q96QU8 1125 aaKnown RBP2.22□□□□□ -2.05
VTA1-204ENST00000491881 PANX1Q96RD7 426 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 NEUROG2Q9H2A3 272 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 WFDC1Q9HC57 220 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 GCNT4Q9P109 453 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 GGA2Q9UJY4 613 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 FGD6Q6ZV73 1430 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 MYO10Q9HD67 2058 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 ADCY9O60503 1353 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 MAGI3Q5TCQ9 1506 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 DOPEY1Q5JWR5 2465 aa2.22□□□□□ -2.05
VTA1-204ENST00000491881 TARBP1Q13395 1621 aaKnown RBP2.21□□□□□ -2.06
VTA1-204ENST00000491881 CICQ96RK0 1608 aaPredicted RBP2.21□□□□□ -2.06
VTA1-204ENST00000491881 ITPR3Q14573 2671 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 IGHV1OR15-9A0A0B4J2B8 117 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 K7EMT4 169 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 NVLO15381 856 aaKnown RBP2.21□□□□□ -2.06
VTA1-204ENST00000491881 ZNF207O43670 478 aaKnown RBP2.21□□□□□ -2.06
VTA1-204ENST00000491881 FLOT1O75955 427 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 OR2F2O95006 317 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 SEMA3DO95025 777 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 MPZL1O95297 269 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 ZNF806P0C7X5 589 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 HMOX2P30519 316 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 OPRK1P41145 380 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 UQCRFS1P47985 274 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 SLC11A1P49279 550 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 SYNJ2BPP57105 145 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 ART3Q13508 389 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 CHRFAM7AQ494W8 412 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 TPTE2P1Q5T6R2 138 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 AP1ARQ63HQ0 302 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 TWF2Q6IBS0 349 aaKnown RBP2.21□□□□□ -2.06
VTA1-204ENST00000491881 SLC25A34Q6PIV7 304 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 TMEM205Q6UW68 189 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 C12orf54Q6X4T0 127 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 MBOAT2Q6ZWT7 520 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 NEGR1Q7Z3B1 354 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 CDKL3Q8IVW4 592 aaPredicted RBP2.21□□□□□ -2.06
VTA1-204ENST00000491881 FAM71AQ8IYT1 594 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 SNX31Q8N9S9 440 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 OR11H7Q8NGC8 314 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 OR9A2Q8NGT5 310 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 LILRB4Q8NHJ6 448 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 PRRC1Q96M27 445 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 ZNF488Q96MN9 340 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 DOK1Q99704 481 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 SCRT1Q9BWW7 348 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 ACTR3CQ9C0K3 210 aaPredicted RBP2.21□□□□□ -2.06
VTA1-204ENST00000491881 GEMIN7Q9H840 131 aaKnown RBP2.21□□□□□ -2.06
VTA1-204ENST00000491881 PTTG3PQ9NZH4 202 aa2.21□□□□□ -2.06
VTA1-204ENST00000491881 WDR7Q9Y4E6 1490 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 SYCE1LA8MT33 242 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 H7C417 338 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 DNASE2O00115 360 aaPredicted RBP2.2□□□□□ -2.06
VTA1-204ENST00000491881 RRP8O43159 456 aaKnown RBP2.2□□□□□ -2.06
VTA1-204ENST00000491881 CHST10O43529 356 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 CCNKO75909 580 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 SLC22A5O76082 557 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 LSM8O95777 96 aaKnown RBP2.2□□□□□ -2.06
VTA1-204ENST00000491881 HLA-DQA1P01909 254 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 IL4P05112 153 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 ERCC1P07992 297 aaPredicted RBP2.2□□□□□ -2.06
VTA1-204ENST00000491881 IL32P24001 234 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 OR1E1P30953 314 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 CXCL12P48061 93 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 PRR3P79522 188 aaKnown RBP2.2□□□□□ -2.06
VTA1-204ENST00000491881 CDK5Q00535 292 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 IGFL1Q6UW32 110 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 NPSR1Q6W5P4 371 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 BZW1Q7L1Q6 419 aaKnown RBP2.2□□□□□ -2.06
VTA1-204ENST00000491881 SCD5Q86SK9 330 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 NKAIN4Q8IVV8 208 aa2.2□□□□□ -2.06
VTA1-204ENST00000491881 GABRG1Q8N1C3 465 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms