RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ZP1P60852 638 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 TSPAN5P62079 268 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 BAMBIQ13145 260 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 OR1Q1Q15612 314 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 OR2A2Q6IF42 318 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 CNEP1R1Q8N9A8 125 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 UXS1Q8NBZ7 420 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 OR5J2Q8NH18 312 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 ABHD3Q8WU67 409 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 RBPMSQ93062 196 aaKnown RBP8.3□□□□□ -1.08
BRCA1-219ENST00000491747 MS4A3Q96HJ5 214 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 PRRG4Q9BZD6 226 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 SERINC1Q9NRX5 453 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 RDH8Q9NYR8 311 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 NKIRAS2Q9NYR9 191 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 RPS6KB2Q9UBS0 482 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 KIF25Q9UIL4 384 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 ING1Q9UK53 422 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-219ENST00000491747 SIGLEC7Q9Y286 467 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 CACNA1DQ01668 2161 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 CENPEQ02224 2701 aa8.3□□□□□ -1.08
BRCA1-219ENST00000491747 GJE1A6NN92 205 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 SMAD9O15198 467 aaKnown RBP8.29□□□□□ -1.08
BRCA1-219ENST00000491747 FMO6PO60774 539 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 SYNGR4O95473 234 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 IFNGP01579 166 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 COX6B1P14854 86 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 PSMB1P20618 241 aaKnown RBP8.29□□□□□ -1.08
BRCA1-219ENST00000491747 SLC2A5P22732 501 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 DIO1P49895 249 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 GDI2P50395 445 aaKnown RBP8.29□□□□□ -1.08
BRCA1-219ENST00000491747 CCR9P51686 369 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 POLR2HP52434 150 aaKnown RBP8.29□□□□□ -1.08
BRCA1-219ENST00000491747 GBX2P52951 348 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-219ENST00000491747 CRMP1Q14194 572 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 FBXL19-AS1Q494R0 122 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 PDSS1Q5T2R2 415 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 THSD4Q6ZMP0 1018 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 WDR88Q6ZMY6 472 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 TMPPEQ6ZT21 453 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF550Q7Z398 422 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 GPAT4Q86UL3 456 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 DMRTC2Q8IXT2 367 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-219ENST00000491747 SYS1Q8N2H4 156 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 OR13C5Q8NGS8 318 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 OR13C2Q8NGS9 318 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 OR2T4Q8NH00 348 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 RNF128Q8TEB7 428 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 SPOCK3Q9BQ16 436 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 OPN3Q9H1Y3 402 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-219ENST00000491747 PPA2Q9H2U2 334 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 BEX1Q9HBH7 125 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 ST6GALNAC2Q9UJ37 374 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 MCTS1Q9ULC4 181 aaKnown RBP8.29□□□□□ -1.08
BRCA1-219ENST00000491747 UNC79Q9P2D8 2635 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 A8MXE2 369 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF879B4DU55 563 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF814B7Z6K7 855 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 OGG1O15527 345 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 SS18L1O75177 396 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-219ENST00000491747 TMEM127O75204 238 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 HPXP02790 462 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 CRHP06850 196 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 UCHL1P09936 223 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 CLUP10909 449 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 RAC3P60763 192 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 MYBPHQ13203 477 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 CDK5R1Q15078 307 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 WBP2NLQ6ICG8 309 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF474Q6S9Z5 364 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-219ENST00000491747 FCRLAQ7L513 359 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 FAM214BQ7L5A3 538 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 LINGO2Q7L985 606 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 NLRC3Q7RTR2 1065 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 PRSS45Q7RTY3 260 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 SLC43A2Q8N370 569 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 LGALS14Q8TCE9 139 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 PHYHIPQ92561 330 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 RNASE6Q93091 150 aaKnown RBP8.29□□□□□ -1.08
BRCA1-219ENST00000491747 CPNE4Q96A23 557 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-219ENST00000491747 C3orf49Q96BT1 292 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 AUNIPQ9H7T9 357 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 PLEKHA1Q9HB21 404 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 NRIP3Q9NQ35 241 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 RCE1Q9Y256 329 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 SESN1Q9Y6P5 492 aa8.29□□□□□ -1.08
BRCA1-219ENST00000491747 A0A0B4J203 849 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 A0A1W2PPK0 400 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 G3V3Q6 166 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 GABARAPH6UMI1 98 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 RAMP1O60894 148 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 SERPINI2O75830 405 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 CFDP00746 253 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-219ENST00000491747 TFP02787 698 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 OR2T7P0C7T2 308 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 FCGR2AP12318 317 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 SELENOPP49908 381 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 OPCMLQ14982 345 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 ELFN2Q5R3F8 820 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 PXDC1Q5TGL8 231 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms