RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 TCRBV3S1A0A5B6 114 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 IQCF6A8MYZ5 107 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 POU1F1P28069 291 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 THBS2P35442 1172 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 SRP9P49458 86 aaKnown RBP12.76□□□□□ -0.37
USP39-217ENST00000491659 RASSF2P50749 326 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 TAF13Q15543 124 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 RSPO1Q2MKA7 263 aaPredicted RBP12.76□□□□□ -0.37
USP39-217ENST00000491659 PGAP1Q75T13 922 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 MRPL21Q7Z2W9 205 aaKnown RBP12.76□□□□□ -0.37
USP39-217ENST00000491659 ZNF283Q8N7M2 679 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 BHLHE23Q8NDY6 225 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 OR10S1Q8NGN2 331 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 OTULINQ96BN8 352 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 UBAP1Q9NZ09 502 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 DNAJB9Q9UBS3 223 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 PPP1R3CQ9UQK1 317 aa12.76□□□□□ -0.37
USP39-217ENST00000491659 RNF212BA8MTL3 300 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 ZNF878C9JN71 531 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 ZNF593O00488 134 aaPredicted RBP12.75□□□□□ -0.37
USP39-217ENST00000491659 GSC2O15499 205 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 PHF1O43189 567 aaPredicted RBP12.75□□□□□ -0.37
USP39-217ENST00000491659 DEAF1O75398 565 aaPredicted RBP12.75□□□□□ -0.37
USP39-217ENST00000491659 CLUP10909 449 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 PSKH1P11801 424 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 ANXA8P13928 327 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 BNIP1Q12981 228 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 GK2Q14410 553 aaPredicted RBP12.75□□□□□ -0.37
USP39-217ENST00000491659 SHQ1Q6PI26 577 aaKnown RBP12.75□□□□□ -0.37
USP39-217ENST00000491659 DRAM2Q6UX65 266 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 SPICQ8N5J4 248 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 ZNF511Q8NB15 262 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 ST7LQ8TDW4 575 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 SLAMF6Q96DU3 332 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 SLC30A2Q9BRI3 323 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 TEX12Q9BXU0 123 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 CADM1Q9BY67 442 aaKnown RBP12.75□□□□□ -0.37
USP39-217ENST00000491659 MED20Q9H944 212 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 CENPMQ9NSP4 180 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 KIF17Q9P2E2 1029 aa12.75□□□□□ -0.37
USP39-217ENST00000491659 FAM183AA6NL82 134 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 IFNL4K9M1U5 179 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 ATP5HO75947 161 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 PNPP00491 289 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 IGHV2-70P01814 119 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 OSMP13725 252 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 OTX1P32242 354 aaPredicted RBP12.74□□□□□ -0.37
USP39-217ENST00000491659 MMP16P51512 607 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 RAD23AP54725 363 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 PRSS12P56730 875 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 BTG1P62324 171 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 GINS1Q14691 196 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 PCK2Q16822 640 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 TEX30Q5JUR7 227 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 NAA40Q86UY6 237 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 ERI1Q8IV48 349 aaKnown RBP12.74□□□□□ -0.37
USP39-217ENST00000491659 HS3ST5Q8IZT8 346 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 KLHL36Q8N4N3 616 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 TEX29Q8N6K0 151 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 PAPD5Q8NDF8 572 aaKnown RBP12.74□□□□□ -0.37
USP39-217ENST00000491659 OR6N2Q8NGY6 317 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 SPRYD4Q8WW59 207 aaPredicted RBP12.74□□□□□ -0.37
USP39-217ENST00000491659 TMEM158Q8WZ71 300 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 SLCO4A1Q96BD0 722 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 MEGF10Q96KG7 1140 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 INTS14Q96SY0 518 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 KCNJ15Q99712 375 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 TMEM100Q9NV29 134 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 DCAF16Q9NXF7 216 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 PCDHB10Q9UN67 800 aa12.74□□□□□ -0.37
USP39-217ENST00000491659 A0A0G2JMP0 313 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 A0A0X1KG70 313 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 PRR23D1E9PI22 279 aaPredicted RBP12.73□□□□□ -0.37
USP39-217ENST00000491659 MLNRO43193 412 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 PLPP2O43688 288 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 GLCEO94923 617 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 HMGN1P05114 100 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 SBK2P0C263 348 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 PRR23D2P0DMB1 279 aaPredicted RBP12.73□□□□□ -0.37
USP39-217ENST00000491659 HSD11B1P28845 292 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 GSTT1P30711 240 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 SLC15A1P46059 708 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 GRB2P62993 217 aaKnown RBP12.73□□□□□ -0.37
USP39-217ENST00000491659 EIF2B1Q14232 305 aaKnown RBP12.73□□□□□ -0.37
USP39-217ENST00000491659 SNAI3Q3KNW1 292 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 LINC01590Q5TEZ4 76 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 FAHD2BQ6P2I3 314 aaPredicted RBP12.73□□□□□ -0.37
USP39-217ENST00000491659 SPATC1Q76KD6 591 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 MUC20Q8N307 709 aaPredicted RBP12.73□□□□□ -0.37
USP39-217ENST00000491659 OR4M2Q8NGB6 313 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 DNAJC9Q8WXX5 260 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 FAHD2AQ96GK7 314 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 PLEKHA8Q96JA3 519 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 OR51V1Q9H2C8 321 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 OPA3Q9H6K4 179 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 GCM1Q9NP62 436 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 NOP16Q9Y3C1 178 aaKnown RBP12.73□□□□□ -0.37
USP39-217ENST00000491659 ATRQ13535 2644 aa12.73□□□□□ -0.37
USP39-217ENST00000491659 LRRC30A6NM36 301 aa12.72□□□□□ -0.37
USP39-217ENST00000491659 F5H5P2 479 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms