RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 CX3CR1P49238 355 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 RHOUQ7L0Q8 258 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 CNN2Q99439 309 aaKnown RBP13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 KLHDC2Q9Y2U9 406 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ITPR3Q14573 2671 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 CELSR1Q9NYQ6 3014 aa13.88□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 IGHV1-46P01743 117 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 APOC1P02654 83 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 SELEP16581 610 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ALOX5APP20292 161 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 CCL8P80075 99 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 TRIP10Q15642 601 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 TSTQ16762 297 aaKnown RBP13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 SNAI3Q3KNW1 292 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 FAM209AQ5JX71 171 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 OR2T2Q6IF00 324 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 OR5AS1Q8N127 324 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ZNF786Q8N393 782 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 TRUB1Q8WWH5 349 aaKnown RBP13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 DIRC2Q96SL1 478 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 MSL2Q9HCI7 577 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 DNAJC27Q9NZQ0 273 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 WARS2Q9UGM6 360 aaKnown RBP13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ZDHHC8Q9ULC8 765 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 TMEM14AQ9Y6G1 99 aa13.87□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 TPD52L2O43399 206 aaKnown RBP13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ANXA2P07355 339 aaKnown RBP13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ADH4P08319 380 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 SLC2A1P11166 492 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 HTR1FP30939 366 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 HCCSP53701 268 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 MRPS11P82912 194 aaKnown RBP13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 CDK5R2Q13319 367 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 GK2Q14410 553 aaPredicted RBP13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 LRRN1Q6UXK5 716 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 MRPL21Q7Z2W9 205 aaKnown RBP13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 SLC35F2Q8IXU6 374 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 RDH5Q92781 318 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ZNF582Q96NG8 517 aaPredicted RBP13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 SP140LQ9H930 580 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 SAP30LQ9HAJ7 183 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ADGRL4Q9HBW9 690 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 DECR2Q9NUI1 292 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 HAO2Q9NYQ3 351 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 COPS3Q9UNS2 423 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 N6AMT1Q9Y5N5 214 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 GMPPBQ9Y5P6 360 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 F8P00451 2351 aa13.86□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 HIVEP1P15822 2718 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ZNF469Q96JG9 3925 aaPredicted RBP13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 A0A096LNT2 108 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 C5orf63A6NC05 138 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 IQCF6A8MYZ5 107 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 VWC2LB2RUY7 222 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 LYNX1G3V0Z9 82 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 XRCC2O43543 280 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 LYNX1P0DP58 116 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ANOS1P23352 680 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 NR4A2P43354 598 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ZNF121P58317 390 aaPredicted RBP13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ZNF92Q03936 586 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 POU4F2Q12837 409 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 GLYATL3Q5SZD4 288 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 KCTD18Q6PI47 426 aaPredicted RBP13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 Q6ZR03 302 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 USP51Q70EK9 711 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 PGAP1Q75T13 922 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 KRT77Q7Z794 578 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 BIVMQ86UB2 503 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 MAPK1IP1LQ8NDC0 245 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 OR8G5Q8NG78 346 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 OR51G2Q8NGK0 314 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 OR2AE1Q8NHA4 323 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ASB17Q8WXJ9 295 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 RFKQ969G6 155 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 RDH12Q96NR8 316 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 MNTQ99583 582 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 OPA3Q9H6K4 179 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 NIPAL2Q9H841 368 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 CHODLQ9H9P2 273 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 C8orf4Q9NR00 106 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 LRP12Q9Y561 859 aa13.85□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ZNF670-ZNF695F2Z2N8 137 aa13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 PHYHO14832 338 aa13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 TBX1O43435 398 aa13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 CD55P08174 381 aa13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 SBK2P0C263 348 aa13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ACHEP22303 614 aa13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 TNFSF4P23510 183 aa13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 COL8A2P25067 703 aa13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 GIFP27352 417 aa13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 PEX2P28328 305 aa13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 PRSS12P56730 875 aa13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 SNRPGP62308 76 aaKnown RBP13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 ELF3P78545 371 aaPredicted RBP13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 TNFAIP6P98066 277 aaPredicted RBP13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 LOXL1Q08397 574 aaPredicted RBP13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 TMED1Q13445 227 aa13.84□□□□□ -0.19
MSH5-SAPCD1-206ENST00000491552 LRRC36Q1X8D7 754 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms