RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ADGRE4PQ86SQ3 457 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 LRRTM1Q86UE6 522 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 SERPINA12Q8IW75 414 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 ELMOD2Q8IZ81 293 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 TEX19Q8NA77 164 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 S100ZQ8WXG8 99 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF799Q96GE5 643 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 MS4A3Q96HJ5 214 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 PGAM5Q96HS1 289 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 SDHCQ99643 169 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-219ENST00000491128 WDR12Q9GZL7 423 aaKnown RBP12.17□□□□□ -0.46
SMPD4-219ENST00000491128 CGGBP1Q9UFW8 167 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-219ENST00000491128 HHLA2Q9UM44 414 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 A3GALT2U3KPV4 340 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 TRBV5-7A0A0A0MS05 114 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 A0A1B0GTI1 187 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 ITGA5P08648 1049 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 TMPRSS3P57727 454 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 CBX3Q13185 183 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF79Q15937 498 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 ACSF3Q4G176 576 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-219ENST00000491128 CD163Q86VB7 1156 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 IZUMO1Q8IYV9 350 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 OR1J2Q8NGS2 313 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 AP3S1Q92572 193 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 LYZL4Q96KX0 146 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 KCNJ15Q99712 375 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 C1QTNF6Q9BXI9 259 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 OR2H1Q9GZK4 316 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 OR51B6Q9H340 312 aa12.17□□□□□ -0.46
SMPD4-219ENST00000491128 ANXA2P2A6NMY6 339 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 NOTOA8MTQ0 251 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 SYNGR3O43761 229 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 RAD51DO75771 328 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 TOXO94900 526 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 CST2P09228 141 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 CD40LGP29965 261 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 PER3P56645 1201 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 MTFR2Q6P444 385 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 PRSS45Q7RTY3 260 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 TPRA1Q86W33 373 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 ZBTB8BQ8NAP8 495 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF671Q8TAW3 534 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 FABP12A6NFH5 140 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 KIR2DL2P43627 348 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-219ENST00000491128 HIST1H3AP68431 136 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 LINC00303Q3SY05 128 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 RNASE12Q5GAN4 147 aaKnown RBP12.16□□□□□ -0.46
SMPD4-219ENST00000491128 HIST2H3PS2Q5TEC6 136 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 HIST2H3AQ71DI3 136 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 NAXEQ8NCW5 288 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 OR1F12Q8NHA8 337 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 LGALS14Q8TCE9 139 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 NPRL2Q8WTW4 380 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 GMPPAQ96IJ6 420 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-219ENST00000491128 PPP1R3EQ9H7J1 279 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 LIN7BQ9HAP6 207 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 NUFIP1Q9UHK0 495 aaKnown RBP12.16□□□□□ -0.46
SMPD4-219ENST00000491128 TIMM10BQ9Y5J6 103 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 V9GY05 133 aa12.16□□□□□ -0.46
SMPD4-219ENST00000491128 IFITM5A6NNB3 132 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 HSPB2A8KAH6 182 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 FARS2O95363 451 aaKnown RBP12.15□□□□□ -0.46
SMPD4-219ENST00000491128 SLC34A2O95436 690 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 MMP7P09237 267 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-219ENST00000491128 MAPK3P27361 379 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-219ENST00000491128 PPP5CP53041 499 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 GRB2P62993 217 aaKnown RBP12.15□□□□□ -0.46
SMPD4-219ENST00000491128 HSPB2Q16082 182 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 BAK1Q16611 211 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 FBXW9Q5XUX1 488 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 RTL6Q6ICC9 239 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 ALKBH2Q6NS38 261 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF544Q6NX49 715 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 FAM180AQ6UWF9 173 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF704Q6ZNC4 412 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-219ENST00000491128 FAM214BQ7L5A3 538 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 OR8H2Q8N162 312 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 OR13C9Q8NGT0 318 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 GPR137Q96N19 417 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 FAIMQ9NVQ4 179 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 MRPS7Q9Y2R9 242 aaKnown RBP12.15□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF175Q9Y473 711 aa12.15□□□□□ -0.46
SMPD4-219ENST00000491128 LCATP04180 440 aa12.15□□□□□ -0.47
SMPD4-219ENST00000491128 IL18Q14116 193 aa12.15□□□□□ -0.47
SMPD4-219ENST00000491128 TMEM244Q5VVB8 128 aa12.15□□□□□ -0.47
SMPD4-219ENST00000491128 HAVCR2Q8TDQ0 301 aa12.15□□□□□ -0.47
SMPD4-219ENST00000491128 LINC00470Q9BZP3 86 aa12.15□□□□□ -0.47
SMPD4-219ENST00000491128 LOC100509620A0A075B734 347 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 A0A1B0GVI7 797 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 BOLA2-SMG1P6H3BVE0 249 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 UBCP0CG48 685 aaKnown RBP12.14□□□□□ -0.47
SMPD4-219ENST00000491128 FCGR2AP12318 317 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 RAB1AP62820 205 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 TAB1Q15750 504 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 STEAP3Q658P3 488 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 Q6ZNX1 250 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 GCDHQ92947 438 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-219ENST00000491128 SNRNP40Q96DI7 357 aaKnown RBP12.14□□□□□ -0.47
SMPD4-219ENST00000491128 SLITRK2Q9H156 845 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms