RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, human

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-208	ENST00000490942	MST1L	Q2TV78	715 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	ZNF684	Q5T5D7	378 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	VHLL	Q6RSH7	139 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	PRSS45	Q7RTY3	260 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	CDH24	Q86UP0	819 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	LRRC75A-AS1	Q8N1F1	130 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	ZNF283	Q8N7M2	679 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	OR10H4	Q8NGA5	316 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	CNIH3	Q8TBE1	160 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	SLC25A40	Q8TBP6	338 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	KLF14	Q8TD94	323 aa	Predicted RBP	13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	HAVCR2	Q8TDQ0	301 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942		Q9H521	79 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	MOB1A	Q9H8S9	216 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	ZNF701	Q9NV72	531 aa	Predicted RBP	13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	CNOT2	Q9NZN8	540 aa	Known RBP	13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	AASS	Q9UDR5	926 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	ZNF391	Q9UJN7	358 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	LAMP3	Q9UQV4	416 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	LRP12	Q9Y561	859 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	PMF1-BGLAP	U3KQ54	211 aa		13.6	□□□□□ -0.23
TRA2A-208	ENST00000490942	DCHS2	Q6V1P9	2916 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942		H7C417	338 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	XRCC2	O43543	280 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	LCAT	P04180	440 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	KRT8	P05787	483 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	CFL1	P23528	166 aa	Known RBP	13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	SLC6A9	P48067	706 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	CX3CR1	P49238	355 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	PPOX	P50336	477 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	PRKX	P51817	358 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	HCCS	P53701	268 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	ACTA2	P62736	377 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	ACTG2	P63267	376 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	LRRN1	Q6UXK5	716 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	HAVCR1	Q96D42	359 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	MRPL37	Q9BZE1	423 aa	Known RBP	13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	OR2J1	Q9GZK6	312 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	MS4A5	Q9H3V2	200 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	LIME1	Q9H400	295 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	CYSLTR2	Q9NS75	346 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	STARD10	Q9Y365	291 aa		13.59	□□□□□ -0.23
TRA2A-208	ENST00000490942	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.58	□□□□□ -0.23
TRA2A-208	ENST00000490942	TMEM129	A0AVI4	362 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	DAPL1	A0PJW8	107 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	EFCAB10	A6NFE3	127 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	METTL15	A6NJ78	407 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	MT-ND5	P03915	603 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	TACSTD2	P09758	323 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	SELE	P16581	610 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	KITLG	P21583	273 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	ZNF121	P58317	390 aa	Predicted RBP	13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	ZNF85	Q03923	595 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	MRPL28	Q13084	256 aa	Known RBP	13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	SMN1	Q16637	294 aa	Known RBP	13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	MSMP	Q1L6U9	139 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	CDON	Q4KMG0	1287 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	ZMAT1	Q5H9K5	638 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	SPATC1	Q76KD6	591 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	SYS1	Q8N2H4	156 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	SNX33	Q8WV41	574 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	SPSB4	Q96A44	273 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	GSX2	Q9BZM3	304 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	OR10A2	Q9H208	303 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	AMBN	Q9NP70	447 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	MRM2	Q9UI43	246 aa	Known RBP	13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	IKZF2	Q9UKS7	526 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	POLQ	O75417	2590 aa		13.58	□□□□□ -0.24
TRA2A-208	ENST00000490942	DSCAM	O60469	2012 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	PRR32	B1ATL7	298 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942		M0R233	179 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	DENR	O43583	198 aa	Known RBP	13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	CCDC159	P0C7I6	412 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	ERVS71-1	P61550	626 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	MED21	Q13503	144 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	GALE	Q14376	348 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	DEFB113	Q30KQ7	82 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	C6orf141	Q5SZD1	244 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	LAIR2	Q6ISS4	152 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	FAM220A	Q7Z4H9	259 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	RFLNB	Q8N5W9	214 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	OR52I1	Q8NGK6	324 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	NRGN	Q92686	78 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	TRMT61A	Q96FX7	289 aa	Known RBP	13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	OR51B6	Q9H340	312 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	FAM206A	Q9NX38	181 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	PSORS1C1	Q9UIG5	152 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	DUSP13	Q9UII6	198 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	DIMT1	Q9UNQ2	313 aa	Known RBP	13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	MYRF	Q9Y2G1	1151 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	PLEKHA6	Q9Y2H5	1048 aa		13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	SETX	Q7Z333	2677 aa	Known RBP	13.57	□□□□□ -0.24
TRA2A-208	ENST00000490942	ANKRD17	O75179	2603 aa	Known RBP	13.56	□□□□□ -0.24
TRA2A-208	ENST00000490942		A0A0U1RQV5	110 aa		13.56	□□□□□ -0.24
TRA2A-208	ENST00000490942	TMEM269	A0A1B0GVZ9	245 aa		13.56	□□□□□ -0.24
TRA2A-208	ENST00000490942	FAM20B	O75063	409 aa		13.56	□□□□□ -0.24
TRA2A-208	ENST00000490942	SRSF10	O75494	262 aa	Known RBP	13.56	□□□□□ -0.24
TRA2A-208	ENST00000490942	APOL3	O95236	402 aa		13.56	□□□□□ -0.24
TRA2A-208	ENST00000490942	ANXA2	P07355	339 aa	Known RBP	13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms