RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 SP6Q3SY56 376 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 TERB2Q8NHR7 220 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 KISS1RQ969F8 398 aaPredicted RBP11.57□□□□□ -0.56
SHOX2-205ENST00000490689 PCDHGA1Q9Y5H4 931 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 CD37P11049 281 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 NKAIN3Q8N8D7 197 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 TMEM52Q8NDY8 209 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 OR5L1Q8NGL2 311 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 TEX101Q9BY14 249 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 OR10A2Q9H208 303 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 MED9Q9NWA0 146 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 B3GALT5Q9Y2C3 310 aa11.57□□□□□ -0.56
SHOX2-205ENST00000490689 TRBV23-1A0A0A0MS06 115 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 CNOT4O95628 575 aaKnown RBP11.56□□□□□ -0.56
SHOX2-205ENST00000490689 SEMA4FO95754 770 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 ADRA2CP18825 462 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 IKZF1Q13422 519 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 FAM53BQ14153 422 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 EXD3Q8N9H8 876 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 SEMA6DQ8NFY4 1073 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 TAAR8Q969N4 342 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 LRFN5Q96NI6 719 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 OR2A5Q96R48 311 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 GDF15Q99988 308 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 TPSD1Q9BZJ3 242 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 KCNE5Q9UJ90 142 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 SERTAD3Q9UJW9 196 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 A0A087WZY1 265 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 STMND1H3BQB6 276 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 PTP4A3O75365 173 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 NKX2-2O95096 273 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 ZIC2O95409 532 aaPredicted RBP11.56□□□□□ -0.56
SHOX2-205ENST00000490689 EML2O95834 649 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 LCATP04180 440 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 GLRA1P23415 457 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 CX3CR1P49238 355 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 F2RL1P55085 397 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 TAS2R46P59540 309 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 CLEC12BQ2HXU8 276 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 PRICKLE4Q2TBC4 344 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 NKAIN2Q5VXU1 208 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 BADQ92934 168 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 LCORQ96JN0 433 aaPredicted RBP11.56□□□□□ -0.56
SHOX2-205ENST00000490689 SFXN1Q9H9B4 322 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 POLMQ9NP87 494 aaPredicted RBP11.56□□□□□ -0.56
SHOX2-205ENST00000490689 MMP26Q9NRE1 261 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 SLC7A11Q9UPY5 501 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 AMDHD2Q9Y303 409 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 AHCTF1Q8WYP5 2266 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 IGHV3-20A0A0C4DH32 117 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 A0A1W2PPH5 198 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 ICOSLGO75144 302 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 IL9P15248 144 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 PPP1CAP62136 330 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 NR0B2Q15466 257 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 RNF212Q495C1 297 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 MIDNQ504T8 468 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 C7orf61Q8IZ16 206 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 C19orf47Q8N9M1 422 aaKnown RBP11.56□□□□□ -0.56
SHOX2-205ENST00000490689 ADAD2Q8NCV1 583 aaKnown RBP11.56□□□□□ -0.56
SHOX2-205ENST00000490689 TMEM104Q8NE00 496 aa11.56□□□□□ -0.56
SHOX2-205ENST00000490689 A8MXK9 166 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 TBX6O95947 436 aaPredicted RBP11.55□□□□□ -0.56
SHOX2-205ENST00000490689 TM4SF4P48230 202 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 MECP2P51608 486 aaKnown RBP11.55□□□□□ -0.56
SHOX2-205ENST00000490689 RPS18P62269 152 aaKnown RBP11.55□□□□□ -0.56
SHOX2-205ENST00000490689 IL10RAQ13651 578 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 TMEM128Q5BJH2 165 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 OR52N5Q8NH56 324 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 MITD1Q8WV92 249 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 WWTR1Q9GZV5 400 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 MRPL22Q9NWU5 206 aaKnown RBP11.55□□□□□ -0.56
SHOX2-205ENST00000490689 DNAJC13O75165 2243 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 PLXNB2O15031 1838 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 NPIPA2E9PIF3 369 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 NPIPA3F8WFD2 350 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 HEXBP07686 556 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 ABOP16442 354 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 MTCP1P56278 107 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 MRGPREQ86SM8 312 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 TSLPQ969D9 159 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 LURAP1Q96LR2 239 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 TSPAN32Q96QS1 320 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 HIST1H2AAQ96QV6 131 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 CLCC1Q96S66 551 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 OCSTAMPQ9BR26 566 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 ZNF2Q9BSG1 426 aaPredicted RBP11.55□□□□□ -0.56
SHOX2-205ENST00000490689 CEP350Q5VT06 3117 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 SDK2Q58EX2 2172 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 PHF1O43189 567 aaPredicted RBP11.55□□□□□ -0.56
SHOX2-205ENST00000490689 JTBO76095 146 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 OR2A4O95047 310 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 CISD3P0C7P0 127 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 ADPRHP54922 357 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 PSG6Q00889 435 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 DEFB133Q30KQ1 61 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 OR2A7Q96R45 310 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 CTSFQ9UBX1 484 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 TNFSF18Q9UNG2 199 aa11.55□□□□□ -0.56
SHOX2-205ENST00000490689 HEATR5BQ9P2D3 2071 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms