RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 SMIM19Q96E16 107 aa11.48□□□□□ -0.57
SNX12-205ENST00000490561 ZC3HAV1LQ96H79 300 aaKnown RBP11.48□□□□□ -0.57
SNX12-205ENST00000490561 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
SNX12-205ENST00000490561 RADILQ96JH8 1075 aa11.48□□□□□ -0.57
SNX12-205ENST00000490561 C4orf45Q96LM5 186 aa11.48□□□□□ -0.57
SNX12-205ENST00000490561 OPALINQ96PE5 141 aa11.48□□□□□ -0.57
SNX12-205ENST00000490561 C1QTNF6Q9BXI9 259 aa11.48□□□□□ -0.57
SNX12-205ENST00000490561 BCL2L14Q9BZR8 327 aa11.48□□□□□ -0.57
SNX12-205ENST00000490561 PBOV1Q9GZY1 135 aa11.48□□□□□ -0.57
SNX12-205ENST00000490561 NPDC1Q9NQX5 325 aaPredicted RBP11.48□□□□□ -0.57
SNX12-205ENST00000490561 NPAP1Q9NZP6 1156 aa11.48□□□□□ -0.57
SNX12-205ENST00000490561 ST6GALNAC2Q9UJ37 374 aa11.48□□□□□ -0.57
SNX12-205ENST00000490561 GTF2A1LQ9UNN4 478 aa11.48□□□□□ -0.57
SNX12-205ENST00000490561 GRIP1Q9Y3R0 1128 aa11.48□□□□□ -0.57
SNX12-205ENST00000490561 ZNF462Q96JM2 2506 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 IGHV2OR16-5A0A0B4J2B6 119 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 A0A0U1RQV5 110 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 H3BSA7 217 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 CCRL2O00421 344 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 INMTO95050 263 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 CELA3BP08861 270 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 DBHP09172 617 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 ZNF35P13682 527 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 CPEP16870 476 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 ZNF12P17014 697 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 CD40P25942 277 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 GRNP28799 593 aaKnown RBP11.47□□□□□ -0.57
SNX12-205ENST00000490561 RPS23P62266 143 aaKnown RBP11.47□□□□□ -0.57
SNX12-205ENST00000490561 TMEM244Q5VVB8 128 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 DMKNQ6E0U4 476 aaPredicted RBP11.47□□□□□ -0.57
SNX12-205ENST00000490561 ALKBH2Q6NS38 261 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 COLCA1Q6ZS62 124 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 FAM57BQ71RH2 274 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 ELMOD2Q8IZ81 293 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 MS4A15Q8N5U1 240 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 OR5AK2Q8NH90 309 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 LINC01560Q8TB33 94 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 SLC7A6Q92536 515 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 G6PC2Q9NQR9 355 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 HIVEP3Q5T1R4 2406 aa11.47□□□□□ -0.57
SNX12-205ENST00000490561 E9PI62 339 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 PYCARD-AS1I3L0S3 204 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 TBX1O43435 398 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 PNPP00491 289 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 LALBAP00709 142 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 SERPINA3P01011 423 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 ISG15P05161 165 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 TFAP2AP05549 437 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 IGFBP2P18065 325 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 CELP19835 753 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 ACHEP22303 614 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 ALDH3B2P48448 385 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 MFGE8Q08431 387 aaPredicted RBP11.46□□□□□ -0.57
SNX12-205ENST00000490561 TSTQ16762 297 aaKnown RBP11.46□□□□□ -0.57
SNX12-205ENST00000490561 YIF1BQ5BJH7 314 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 WDR38Q5JTN6 314 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 PRSS45Q7RTY3 260 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 GPR141Q7Z602 305 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 DMRTC2Q8IXT2 367 aaPredicted RBP11.46□□□□□ -0.57
SNX12-205ENST00000490561 PRSS35Q8N3Z0 413 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 ZNF676Q8N7Q3 588 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 OR8B12Q8NGG6 310 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 AKAP1Q92667 903 aaKnown RBP eCLIP11.46□□□□□ -0.57
SNX12-205ENST00000490561 SPOCK3Q9BQ16 436 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 FRRS1LQ9P0K9 344 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 ZNF281Q9Y2X9 895 aa11.46□□□□□ -0.57
SNX12-205ENST00000490561 A0A1B0GVI7 797 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 OR4C45A6NMZ5 311 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 VSTM5A8MXK1 200 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 SMPD2O60906 423 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 MTRF1O75570 445 aaKnown RBP11.45□□□□□ -0.58
SNX12-205ENST00000490561 CCL2P13500 99 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 GABRA5P31644 462 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 WNT5AP41221 380 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 KIR3DL2P43630 455 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 GTF2A1P52655 376 aaPredicted RBP11.45□□□□□ -0.58
SNX12-205ENST00000490561 GP2P55259 537 aaKnown RBP11.45□□□□□ -0.58
SNX12-205ENST00000490561 UCP2P55851 309 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 NANOS3P60323 173 aaKnown RBP11.45□□□□□ -0.58
SNX12-205ENST00000490561 BSPH1Q075Z2 132 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 TIMM50Q3ZCQ8 353 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 NCMAPQ5T1S8 102 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 LIPKQ5VXJ0 399 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 C22orf34Q6ZV56 151 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 MYPOPQ86VE0 399 aaPredicted RBP11.45□□□□□ -0.58
SNX12-205ENST00000490561 PHC2Q8IXK0 858 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 NUP37Q8NFH4 326 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 ABHD4Q8TB40 342 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 RNF166Q96A37 237 aaPredicted RBP11.45□□□□□ -0.58
SNX12-205ENST00000490561 BRD7Q9NPI1 651 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 NDUFB11Q9NX14 153 aa11.45□□□□□ -0.58
SNX12-205ENST00000490561 LOC390937A0A1W2PQ73 354 aa11.44□□□□□ -0.58
SNX12-205ENST00000490561 DHRS7CA6NNS2 312 aa11.44□□□□□ -0.58
SNX12-205ENST00000490561 PRSS44E7EML9 344 aa11.44□□□□□ -0.58
SNX12-205ENST00000490561 ZFPL1O95159 310 aa11.44□□□□□ -0.58
SNX12-205ENST00000490561 ATE1O95260 518 aa11.44□□□□□ -0.58
SNX12-205ENST00000490561 TTRP02766 147 aa11.44□□□□□ -0.58
SNX12-205ENST00000490561 HLA-DPB1P04440 258 aa11.44□□□□□ -0.58
SNX12-205ENST00000490561 CD3EP07766 207 aa11.44□□□□□ -0.58
SNX12-205ENST00000490561 SLC2A1P11166 492 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms