RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PGM2L1Q6PCE3 622 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 DPY19L2P2Q6ZN68 376 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 CYP4Z1Q86W10 505 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 CELF2-AS1Q8N7Q2 184 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 UFSP2Q9NUQ7 469 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 TMCC3Q9ULS5 477 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 CAPN7Q9Y6W3 813 aa13.19□□□□□ -0.3
PLOD3-216ENST00000489927 A0A1W2PRQ8 180 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 F5H5K5 113 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 NME4O00746 187 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 NDUFA7O95182 113 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 H1F0P07305 194 aaKnown RBP13.18□□□□□ -0.3
PLOD3-216ENST00000489927 MELTFP08582 738 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 ACSM4P0C7M7 580 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 CRABP1P29762 137 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 CFHR2P36980 270 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 CD200P41217 278 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 RPS6KA3P51812 740 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 RAD23AP54725 363 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 DGCR6Q14129 220 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 FGD3Q5JSP0 725 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 DNM1P34Q6PK57 102 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 BRICD5Q6PL45 260 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 CFAP77Q6ZQR2 320 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 ARPINQ7Z6K5 226 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 NAA40Q86UY6 237 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 OR11L1Q8NGX0 322 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 ERGIC1Q969X5 290 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 TECTBQ96PL2 329 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 CITED1Q99966 193 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 MMADHCQ9H3L0 296 aaPredicted RBP13.18□□□□□ -0.3
PLOD3-216ENST00000489927 SRA1Q9HD15 236 aaKnown RBP13.18□□□□□ -0.3
PLOD3-216ENST00000489927 FGFR1OP2Q9NVK5 253 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 ARMCX1Q9P291 453 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 CTSZQ9UBR2 303 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 B9D1Q9UPM9 204 aa13.18□□□□□ -0.3
PLOD3-216ENST00000489927 NOTCH1P46531 2555 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 TRBV4-1A0A0J9YWV2 114 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 CENPVL3A0A0U1RRI6 287 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 CLPSL1A2RUU4 121 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 UNC119BA6NIH7 251 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 ZNF879B4DU55 563 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 PPP1R3DO95685 299 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 MMP9P14780 707 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 MDH1P40925 334 aaKnown RBP13.17□□□□□ -0.3
PLOD3-216ENST00000489927 GSK3BP49841 420 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 NPY4RP50391 375 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 SLC7A2P52569 658 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 SEC23BQ15437 767 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 SFRP4Q6FHJ7 346 aaPredicted RBP13.17□□□□□ -0.3
PLOD3-216ENST00000489927 SLC18B1Q6NT16 456 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 SMARCD3Q6STE5 483 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 PGAP1Q75T13 922 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 RHOUQ7L0Q8 258 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 HDXQ7Z353 690 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 LINC00346Q8IVM7 164 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 OR6V1Q8N148 313 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 TMEM86BQ8N661 226 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 SLC26A10Q8NG04 563 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 SLCO4A1Q96BD0 722 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 FAM71F1Q96KD3 344 aaPredicted RBP13.17□□□□□ -0.3
PLOD3-216ENST00000489927 CCT8L2Q96SF2 557 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 TBX15Q96SF7 602 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 PITX2Q99697 317 aa13.17□□□□□ -0.3
PLOD3-216ENST00000489927 A0A0G2JK05 382 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 P2RY10O00398 339 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 TNFRSF13BO14836 293 aaPredicted RBP13.16□□□□□ -0.3
PLOD3-216ENST00000489927 TOX4O94842 621 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 LCATP04180 440 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 NCK1P16333 377 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 CA6P23280 308 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 KRTAP10-3P60369 221 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 TRAP1Q12931 704 aaKnown RBP13.16□□□□□ -0.3
PLOD3-216ENST00000489927 MALLQ13021 153 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 CD276Q5ZPR3 534 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 SPRYD4Q8WW59 207 aaPredicted RBP13.16□□□□□ -0.3
PLOD3-216ENST00000489927 FAM162AQ96A26 154 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 ERMAPQ96PL5 475 aaPredicted RBP13.16□□□□□ -0.3
PLOD3-216ENST00000489927 NMNAT3Q96T66 252 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 ATF6BQ99941 703 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 MMP27Q9H306 513 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 VIPAS39Q9H9C1 493 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 SMURF1Q9HCE7 757 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 PNRC2Q9NPJ4 139 aaKnown RBP13.16□□□□□ -0.3
PLOD3-216ENST00000489927 NDUFAF4Q9P032 175 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 KIF17Q9P2E2 1029 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 ERVK-18Q9QC07 812 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 RNF7Q9UBF6 113 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 AURKCQ9UQB9 309 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 POMT1Q9Y6A1 747 aa13.16□□□□□ -0.3
PLOD3-216ENST00000489927 C3orf80F5H4A9 247 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 M0QZ24 198 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 SLC22A2O15244 555 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 DIRAS1O95057 198 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 LIPFP07098 398 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 RHCEP18577 417 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 GGT2P36268 569 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 ECH1Q13011 328 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 OR8G1Q15617 311 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 KCNJ8Q15842 424 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms