RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 STUMQ69YW2 141 aa2.19□□□□□ -2.06
CCDC39-206ENST00000489868 REEP3Q6NUK4 255 aa2.19□□□□□ -2.06
CCDC39-206ENST00000489868 C12orf54Q6X4T0 127 aa2.19□□□□□ -2.06
CCDC39-206ENST00000489868 C16orf47Q6ZP98 133 aaPredicted RBP2.19□□□□□ -2.06
CCDC39-206ENST00000489868 ARL6IP6Q8N6S5 226 aa2.19□□□□□ -2.06
CCDC39-206ENST00000489868 SLC2A14Q8TDB8 520 aa2.19□□□□□ -2.06
CCDC39-206ENST00000489868 CAPSLQ8WWF8 208 aa2.19□□□□□ -2.06
CCDC39-206ENST00000489868 CPNE4Q96A23 557 aaPredicted RBP2.19□□□□□ -2.06
CCDC39-206ENST00000489868 ZNF230Q9UIE0 474 aaPredicted RBP2.19□□□□□ -2.06
CCDC39-206ENST00000489868 UBIAD1Q9Y5Z9 338 aa2.19□□□□□ -2.06
CCDC39-206ENST00000489868 IGHV1-3A0A0C4DH29 117 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 EIF3HO15372 352 aaKnown RBP eCLIP2.18□□□□□ -2.06
CCDC39-206ENST00000489868 SLC1A1P43005 524 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 TNNT2P45379 298 aaPredicted RBP2.18□□□□□ -2.06
CCDC39-206ENST00000489868 EIF3EP60228 445 aaKnown RBP2.18□□□□□ -2.06
CCDC39-206ENST00000489868 SEMG2Q02383 582 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 C9orf135Q5VTT2 229 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 CASP12Q6UXS9 341 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 MBOAT2Q6ZWT7 520 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 FAM71AQ8IYT1 594 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 CSGALNACT2Q8N6G5 542 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 OR4M1Q8NGD0 313 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 ELMO1Q92556 727 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 ECHDC3Q96DC8 303 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 C18orf15Q96N68 181 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 ANKRA2Q9H9E1 313 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 CCDC59Q9P031 241 aaKnown RBP2.18□□□□□ -2.06
CCDC39-206ENST00000489868 TMCC3Q9ULS5 477 aa2.18□□□□□ -2.06
CCDC39-206ENST00000489868 PCDH11XQ9BZA7 1347 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 ZNF407Q9C0G0 2248 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 NMT2O60551 498 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 EIF1BO60739 113 aaKnown RBP2.17□□□□□ -2.06
CCDC39-206ENST00000489868 SERPINB7O75635 380 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 PAHP00439 452 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 EIF1P41567 113 aaKnown RBP2.17□□□□□ -2.06
CCDC39-206ENST00000489868 CMC4P56277 68 aaPredicted RBP2.17□□□□□ -2.06
CCDC39-206ENST00000489868 PPP1R7Q15435 360 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 YIF1BQ5BJH7 314 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 XKR7Q5GH72 579 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 H3F3CQ6NXT2 135 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 SLC16A14Q7RTX9 510 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 SLC22A9Q8IVM8 553 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 ZNF664Q8N3J9 261 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 OR56B2PQ8NGI1 322 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 OR1J4Q8NGS1 313 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 CENPKQ9BS16 269 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 TMEM243Q9BU79 118 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 CHCHD7Q9BUK0 85 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 LINC00574Q9H8X3 128 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 RETNQ9HD89 108 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 MED4Q9NPJ6 270 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 COX16Q9P0S2 106 aa2.17□□□□□ -2.06
CCDC39-206ENST00000489868 IGKV1-27A0A075B6S5 117 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 CEACAM18A8MTB9 384 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 SIRPB1O00241 398 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 NTF3P20783 257 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 PSMB5P28074 263 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 OR1E1P30953 314 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 CD70P32970 193 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 SYKP43405 635 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 NDUFA8P51970 172 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 CEP55Q53EZ4 464 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 OR10G6Q8NH81 332 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 AKR7LQ8NHP1 331 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 OR51E1Q8TCB6 317 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 NRBF2Q96F24 287 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 MTCH1Q9NZJ7 389 aa2.16□□□□□ -2.06
CCDC39-206ENST00000489868 TICRRQ7Z2Z1 1910 aa2.15□□□□□ -2.06
CCDC39-206ENST00000489868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.15□□□□□ -2.07
CCDC39-206ENST00000489868 HEATR9A2RTY3 570 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 PDZK1P1A8MUH7 402 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 CNMDO75829 334 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 CSNK2A2P19784 350 aaPredicted RBP2.15□□□□□ -2.07
CCDC39-206ENST00000489868 IL32P24001 234 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 ELF3P78545 371 aaPredicted RBP2.15□□□□□ -2.07
CCDC39-206ENST00000489868 PPIDQ08752 370 aaKnown RBP2.15□□□□□ -2.07
CCDC39-206ENST00000489868 DMC1Q14565 340 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 ZNF235Q14590 738 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 TRAM2Q15035 370 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 PRAMEF20Q5VT98 475 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 C22orf42Q6IC83 251 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 ADM2Q7Z4H4 148 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 CMC1Q7Z7K0 106 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 STK40Q8N2I9 435 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 GTPBP8Q8N3Z3 284 aaPredicted RBP2.15□□□□□ -2.07
CCDC39-206ENST00000489868 CBR4Q8N4T8 237 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 ZNF680Q8NEM1 530 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 OR4A4PQ8NGN8 299 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 ZNF606Q8WXB4 792 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 SLIRPQ9GZT3 109 aaKnown RBP2.15□□□□□ -2.07
CCDC39-206ENST00000489868 ZNF442Q9H7R0 627 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 MYOZ1Q9NP98 299 aaPredicted RBP2.15□□□□□ -2.07
CCDC39-206ENST00000489868 RHBDL2Q9NX52 303 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 SLC17A4Q9Y2C5 497 aa2.15□□□□□ -2.07
CCDC39-206ENST00000489868 ZSWIM8A7E2V4 1837 aa2.14□□□□□ -2.07
CCDC39-206ENST00000489868 TRIP11Q15643 1979 aa2.14□□□□□ -2.07
CCDC39-206ENST00000489868 TRBV9A0A0B4J1U6 114 aa2.14□□□□□ -2.07
CCDC39-206ENST00000489868 TNFRSF11BO00300 401 aa2.14□□□□□ -2.07
CCDC39-206ENST00000489868 CDC40O60508 579 aaKnown RBP eCLIP2.14□□□□□ -2.07
CCDC39-206ENST00000489868 PLIN3O60664 434 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms