RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 RNF212BA8MTL3 300 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 GOLGA8MH3BSY2 632 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 RAD51BO15315 384 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 ERI3O43414 337 aaKnown RBP2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 EEDO75530 441 aaKnown RBP2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 TRAPPC6AO75865 159 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 HBE1P02100 147 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 CD55P08174 381 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 HCKP08631 526 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 HOXC4P09017 264 aaPredicted RBP2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 TACSTD2P09758 323 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 SMIM10L1P0DMW3 83 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 COX5BP10606 129 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 HSPD1P10809 573 aaKnown RBP2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF7P17097 686 aaPredicted RBP2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 BTCP35070 178 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 CDKN2CP42773 168 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 MAGEA2P43356 314 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 YAP1P46937 504 aaKnown RBP2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 ATP4BP51164 291 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 UBE2E1P51965 193 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 CRYBA2P53672 197 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 APOC4P55056 127 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 IFFO1Q0D2I5 559 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 ABRAXAS2Q15018 415 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNHIT3Q15649 155 aaPredicted RBP2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 CYP51A1Q16850 503 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 OR5M10Q6IEU7 315 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 UFSP1Q6NVU6 142 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 PLEKHG7Q6ZR37 379 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 SH2D5Q6ZV89 423 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 CMC1Q7Z7K0 106 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 HOGA1Q86XE5 327 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 LIX1Q8N485 282 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 VN1R2Q8NFZ6 395 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 OR51A7Q8NH64 312 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 RNF138Q8WVD3 245 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 FLYWCH2Q96CP2 140 aaKnown RBP2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 SMIM10Q96HG1 83 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 POM121L2Q96KW2 1035 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 HSFY1Q96LI6 401 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 UBE2E2Q96LR5 201 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 KIR2DL4Q99706 377 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 MICU1Q9BPX6 476 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 RSG1Q9BU20 258 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 CCDC28BQ9BUN5 200 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 HCAR1Q9BXC0 346 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 HOXD1Q9GZZ0 328 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 SAV1Q9H4B6 383 aaPredicted RBP2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 ASB8Q9H765 288 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 SLC38A10Q9HBR0 1119 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 CCDC59Q9P031 241 aaKnown RBP2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 LGALS13Q9UHV8 139 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 C3orf18Q9UK00 162 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 FBXL3Q9UKT7 428 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 ING4Q9UNL4 249 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 RPL36Q9Y3U8 105 aaKnown RBP2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 ZSWIM8A7E2V4 1837 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 PTPRFP10586 1907 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 MYH1P12882 1939 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 MYH7P12883 1935 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RLFQ13129 1914 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 DOCK3Q8IZD9 2030 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 A0A1B0GVI7 797 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 A0A1B0GWB2 263 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 BCLAF3A2AJT9 711 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 MEIOCA2RUB1 952 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF233A6NK53 670 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 USP27XA6NNY8 438 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 NCBP2LA6PVI3 153 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 SMIM1B2RUZ4 78 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 F6UB75 175 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 H0YHG0 523 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 J3QLI3 93 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 K7EQD1 137 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 GABRPO00591 440 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 NME4O00746 187 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 MRPS12O15235 138 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CNMDO75829 334 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 SEMA3DO95025 777 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 SEMA4FO95754 770 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 LSM8O95777 96 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CD74P04233 296 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 EDN1P05305 212 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RETP07949 1114 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RNF224P0DH78 156 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RNH1P13489 461 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 PVRP15151 417 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 IGFBP5P24593 272 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 IL2RGP31785 369 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 TNFSF9P41273 254 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ACTR1BP42025 376 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ALDH3B2P48448 385 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RAB7AP51149 207 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CLDN6P56747 220 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 LMO4P61968 165 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 SLC35B1P78383 322 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 SP4Q02446 784 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 PDIA2Q13087 525 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 GNMTQ14749 295 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms