RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 LINC00052Q96N35 136 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 RASL10BQ96S79 203 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 VSIG4Q9Y279 399 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 ZNHIT1O43257 154 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 RP2O75695 350 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 RLN2P04090 185 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 RRASP10301 218 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 ZNF43P17038 809 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 PTGS2P35354 604 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 OR3A4PP47883 348 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 ZNF121P58317 390 aaPredicted RBP13.94□□□□□ -0.18
BRD9-208ENST00000489816 ZNF813Q6ZN06 617 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 ZNF546Q86UE3 836 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 ADAD2Q8NCV1 583 aaKnown RBP13.94□□□□□ -0.18
BRD9-208ENST00000489816 DNASE2BQ8WZ79 361 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 MED30Q96HR3 178 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 CST11Q9H112 138 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 EMC3Q9P0I2 261 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 RABL2AQ9UBK7 228 aaPredicted RBP13.94□□□□□ -0.18
BRD9-208ENST00000489816 CYB5R1Q9UHQ9 305 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 RABL2BQ9UNT1 228 aa13.94□□□□□ -0.18
BRD9-208ENST00000489816 MAP1BP46821 2468 aaKnown RBP13.94□□□□□ -0.18
BRD9-208ENST00000489816 C13orf42A0A1B0GVH6 325 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 HCKP08631 526 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 ZNF93P35789 620 aaPredicted RBP13.93□□□□□ -0.18
BRD9-208ENST00000489816 CLDN17P56750 224 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 BAMBIQ13145 260 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 NHLRC3Q5JS37 347 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 WDR45BQ5MNZ6 344 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 LY6G6FQ5SQ64 297 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 PRSS42Q7Z5A4 293 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 OR1M1Q8NGA1 313 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 ELL3Q9HB65 397 aaPredicted RBP13.93□□□□□ -0.18
BRD9-208ENST00000489816 METTL21EPA6NDL7 271 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 SOCS1O15524 211 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 ZFAND5O76080 213 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 WDPCPO95876 746 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 CCL4P13236 92 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 ZNF20P17024 532 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 LAP3P28838 519 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 CLDN6P56747 220 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 COL19A1Q14993 1142 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 LPAL2Q16609 132 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 PPP1R3BQ86XI6 285 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 ZNF283Q8N7M2 679 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 RBPMSQ93062 196 aaKnown RBP13.93□□□□□ -0.18
BRD9-208ENST00000489816 PRDM6Q9NQX0 595 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 KCNK7Q9Y2U2 307 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 WIF1Q9Y5W5 379 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 SULT2B1O00204 365 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 PLATP00750 562 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 PDGFBP01127 241 aaPredicted RBP13.93□□□□□ -0.18
BRD9-208ENST00000489816 ITGB2P05107 769 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 CD96P40200 585 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 ACY1Q03154 408 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 PPP1R1AQ13522 171 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 TMEM65Q6PI78 240 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 GSG1LQ6UXU4 331 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.93□□□□□ -0.18
BRD9-208ENST00000489816 WDSUB1Q8N9V3 476 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 UCN2Q96RP3 112 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 WDR13Q9H1Z4 485 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 SDHAF2Q9NX18 166 aa13.93□□□□□ -0.18
BRD9-208ENST00000489816 NMBP08949 121 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 ZNF735P0CB33 412 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 PTGDSP41222 190 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 CAPZA1P52907 286 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 GLIPR1L1Q6UWM5 242 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 OR8B12Q8NGG6 310 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 IFT46Q9NQC8 304 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 B3GALT5Q9Y2C3 310 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 ZNF726A6NNF4 738 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 K7ESF4 209 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 TSPAN4O14817 238 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 CD34P28906 385 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 HLA-BQ31612 363 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 Q7L0L9 218 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 DTX1Q86Y01 620 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 GALNT11Q8NCW6 608 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 ZBTB8AQ96BR9 441 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 ALKBH4Q9NXW9 302 aa13.92□□□□□ -0.18
BRD9-208ENST00000489816 MEGF11A6BM72 1044 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 OR2AT4A6NND4 320 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 HTR3BO95264 441 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 IGHMP01871 453 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 UBCP0CG48 685 aaKnown RBP13.91□□□□□ -0.18
BRD9-208ENST00000489816 RAB3AP20336 220 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 MMP16P51512 607 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 TUSC1Q2TAM9 212 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 OR5D14Q8NGL3 314 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 RADILQ96JH8 1075 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 ZNF75AQ96N20 296 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 UTP23Q9BRU9 249 aaKnown RBP13.91□□□□□ -0.18
BRD9-208ENST00000489816 SMOC1Q9H4F8 434 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 ADAMTS9Q9P2N4 1935 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 TRAV14DV4A0A0A6YYC5 116 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 OR5H14A6NHG9 310 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 SDCBPO00560 298 aaPredicted RBP13.91□□□□□ -0.18
BRD9-208ENST00000489816 IGHG1P01857 330 aa13.91□□□□□ -0.18
BRD9-208ENST00000489816 ERCC1P07992 297 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms