RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TMUB1Q9BVT8 246 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 ADGRL4Q9HBW9 690 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 CENPMQ9NSP4 180 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 FAM118AQ9NWS6 357 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 CLN6Q9NWW5 311 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 ZNF391Q9UJN7 358 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 PURGQ9UJV8 347 aaKnown RBP9.47□□□□□ -0.89
CPSF7-212ENST00000489728 FZR1Q9UM11 496 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 NOP16Q9Y3C1 178 aaKnown RBP9.47□□□□□ -0.89
CPSF7-212ENST00000489728 RTTNQ86VV8 2226 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 A0A1B0GWJ7 208 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 LOC390937A0A1W2PQ73 354 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 IQCF6A8MYZ5 107 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 SSX4O60224 188 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 NDUFS7O75251 213 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 CD55P08174 381 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 SBK2P0C263 348 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 SLC25A16P16260 332 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 PEX2P28328 305 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 CX3CR1P49238 355 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 PDLIM4P50479 330 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF81P51508 661 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 PSMA6P60900 246 aaKnown RBP9.46□□□□□ -0.9
CPSF7-212ENST00000489728 ACTC1P68032 377 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 ACTA1P68133 377 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 EGR3Q06889 387 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 MAD2L1BPQ15013 274 aaPredicted RBP9.46□□□□□ -0.9
CPSF7-212ENST00000489728 ZIK1Q3SY52 487 aaPredicted RBP9.46□□□□□ -0.9
CPSF7-212ENST00000489728 TTC23Q5W5X9 447 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.46□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF540Q8NDQ6 660 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 FAM168AQ92567 244 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 SPSB4Q96A44 273 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 CMBLQ96DG6 245 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 Q96MT0 163 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 MYCBPQ99417 103 aaPredicted RBP9.46□□□□□ -0.9
CPSF7-212ENST00000489728 MROQ9BYG7 248 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 RGCCQ9H4X1 137 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 RNPEPL1Q9HAU8 725 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 DLL4Q9NR61 685 aa9.46□□□□□ -0.9
CPSF7-212ENST00000489728 MAP1AP78559 2803 aaPredicted RBP9.45□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF670-ZNF695F2Z2N8 137 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 DLGAP1O14490 977 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 OR2T7P0C7T2 308 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 NAT2P11245 290 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 CD99P14209 185 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 DAOP14920 347 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 GABRB1P18505 474 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 TNFSF4P23510 183 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 GIFP27352 417 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 MTNR1AP48039 350 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 PRKXP51817 358 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 SLC34A1Q06495 639 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 CDK5R2Q13319 367 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 IL18R1Q13478 541 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 GK2Q14410 553 aaPredicted RBP9.45□□□□□ -0.9
CPSF7-212ENST00000489728 SNCBQ16143 134 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 TMEM255AQ5JRV8 349 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 LPCAT4Q643R3 524 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 PGAP1Q75T13 922 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 PRSS45Q7RTY3 260 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 MRPL21Q7Z2W9 205 aaKnown RBP9.45□□□□□ -0.9
CPSF7-212ENST00000489728 BCDIN3DQ7Z5W3 292 aaKnown RBP9.45□□□□□ -0.9
CPSF7-212ENST00000489728 KRT77Q7Z794 578 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 EGFL6Q8IUX8 553 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 SLC35F2Q8IXU6 374 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF679Q8IYX0 411 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF786Q8N393 782 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF525Q8N782 197 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF283Q8N7M2 679 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 SETD9Q8NE22 299 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 OR8G5Q8NG78 346 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 OR2T27Q8NH04 317 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 RHOXF1Q8NHV9 184 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 C10orf105Q8TEF2 133 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 COX4I2Q96KJ9 171 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 OR8B4Q96RC9 309 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 AMELYQ99218 206 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 REPIN1Q9BWE0 567 aaKnown RBP9.45□□□□□ -0.9
CPSF7-212ENST00000489728 SLC22A4Q9H015 551 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 POFUT1Q9H488 388 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 MOB1AQ9H8S9 216 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 PTTG3PQ9NZH4 202 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 DNAJC27Q9NZQ0 273 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 KLHDC2Q9Y2U9 406 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 LRP12Q9Y561 859 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 PCDHGB1Q9Y5G3 927 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 HSPE1-MOB4S4R3N1 261 aa9.45□□□□□ -0.9
CPSF7-212ENST00000489728 HIVEP1P15822 2718 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 ZSCAN5BA6NJL1 495 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 H0YAE9 185 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 H0YHG0 523 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 H0YJX3 145 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 ENTPD6O75354 484 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 MRPL3P09001 348 aaKnown RBP9.44□□□□□ -0.9
CPSF7-212ENST00000489728 ACHEP22303 614 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 DDOSTP39656 456 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 MMP16P51512 607 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 RIDAP52758 137 aaKnown RBP9.44□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF121P58317 390 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms