RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 SRP9P49458 86 aaKnown RBP16.07■□□□□ 0.16
MRPL55-230ENST00000489430 GK2Q14410 553 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-230ENST00000489430 AVPI1Q5T686 147 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 OR2T2Q6IF00 324 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 SHQ1Q6PI26 577 aaKnown RBP16.07■□□□□ 0.16
MRPL55-230ENST00000489430 CELF2-AS1Q8N7Q2 184 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 ZNF511Q8NB15 262 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 OR6K6Q8NGW6 343 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 SLCO4A1Q96BD0 722 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 SLC22A4Q9H015 551 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 OPA3Q9H6K4 179 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 MARCH7Q9H992 704 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 HIF1ANQ9NWT6 349 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 PPP1R3CQ9UQK1 317 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 NOP16Q9Y3C1 178 aaKnown RBP16.07■□□□□ 0.16
MRPL55-230ENST00000489430 NPTNQ9Y639 398 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 MALRD1Q5VYJ5 2156 aa16.07■□□□□ 0.16
MRPL55-230ENST00000489430 ZNF878C9JN71 531 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 GLCEO94923 617 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 FSTL3O95633 263 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 APOC1P02654 83 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 GYPBP06028 91 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 SPARCP09486 303 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 ERFP50548 548 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 GRB2P62993 217 aaKnown RBP16.06■□□□□ 0.16
MRPL55-230ENST00000489430 CDK5Q00535 292 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 GINS1Q14691 196 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 TMEM155Q4W5P6 130 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 PGAP1Q75T13 922 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 PARP8Q8N3A8 854 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 ATG16L2Q8NAA4 619 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 ST7LQ8TDW4 575 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 SLAMF6Q96DU3 332 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 OR2V2Q96R30 315 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 KCNJ15Q99712 375 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 COPS4Q9BT78 406 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 TOR3AQ9H497 397 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 SP140LQ9H930 580 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 NTN4Q9HB63 628 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 TMEM100Q9NV29 134 aa16.06■□□□□ 0.16
MRPL55-230ENST00000489430 PRODHO43272 600 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 CLUP10909 449 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 GATA3P23771 443 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 POU1F1P28069 291 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 GSTT1P30711 240 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 RPS27P42677 84 aaKnown RBP16.05■□□□□ 0.16
MRPL55-230ENST00000489430 SLC6A9P48067 706 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 ZNF181Q2M3W8 571 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 LYPD4Q6UWN0 246 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 SHFQ7M4L6 423 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 OR5AS1Q8N127 324 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 SPICQ8N5J4 248 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 IQCF1Q8N6M8 205 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 ITLN1Q8WWA0 313 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 ERGIC1Q969X5 290 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 UTP4Q969X6 686 aaKnown RBP16.05■□□□□ 0.16
MRPL55-230ENST00000489430 INTS14Q96SY0 518 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 GAL3ST1Q99999 423 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 GCM1Q9NP62 436 aa16.05■□□□□ 0.16
MRPL55-230ENST00000489430 CUBNO60494 3623 aa16.04■□□□□ 0.16
MRPL55-230ENST00000489430 PRR23D1E9PI22 279 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-230ENST00000489430 IGHV2-70P01814 119 aa16.04■□□□□ 0.16
MRPL55-230ENST00000489430 PRR23D2P0DMB1 279 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-230ENST00000489430 GATA4P43694 442 aa16.04■□□□□ 0.16
MRPL55-230ENST00000489430 SCGB2A2Q13296 93 aa16.04■□□□□ 0.16
MRPL55-230ENST00000489430 TAF13Q15543 124 aa16.04■□□□□ 0.16
MRPL55-230ENST00000489430 SPRNQ5BIV9 151 aa16.04■□□□□ 0.16
MRPL55-230ENST00000489430 MRPL21Q7Z2W9 205 aaKnown RBP16.04■□□□□ 0.16
MRPL55-230ENST00000489430 NAA40Q86UY6 237 aa16.04■□□□□ 0.16
MRPL55-230ENST00000489430 LRRC28Q86X40 367 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-230ENST00000489430 RNF133Q8WVZ7 376 aa16.04■□□□□ 0.16
MRPL55-230ENST00000489430 DUS3LQ96G46 650 aaKnown RBP16.04■□□□□ 0.16
MRPL55-230ENST00000489430 MEGF10Q96KG7 1140 aa16.04■□□□□ 0.16
MRPL55-230ENST00000489430 MDFIQ99750 246 aa16.04■□□□□ 0.16
MRPL55-230ENST00000489430 REPIN1Q9BWE0 567 aaKnown RBP16.04■□□□□ 0.16
MRPL55-230ENST00000489430 SLC25A19Q9HC21 320 aa16.04■□□□□ 0.16
MRPL55-230ENST00000489430 FBN1P35555 2871 aaKnown RBP16.03■□□□□ 0.16
MRPL55-230ENST00000489430 PPIAL4EA0A075B759 164 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 PPIAL4CA0A0B4J2A2 164 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 FAM183AA6NL82 134 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 PPIAL4DF5H284 164 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 PPIAL4FP0DN26 164 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 PSKH1P11801 424 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 PRKACGP22612 351 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 SLC35D3Q5M8T2 416 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 FAHD1Q6P587 224 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 CXXC5Q7LFL8 322 aaKnown RBP16.03■□□□□ 0.16
MRPL55-230ENST00000489430 TIGD4Q8IY51 512 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 HS3ST5Q8IZT8 346 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 MUC20Q8N307 709 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-230ENST00000489430 KLHL36Q8N4N3 616 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 ZNF454Q8N9F8 522 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 OR5K1Q8NHB7 308 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 SPRYD4Q8WW59 207 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-230ENST00000489430 TMEM158Q8WZ71 300 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 SIGLEC11Q96RL6 698 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 G6PC2Q9NQR9 355 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 PAPOLBQ9NRJ5 636 aaKnown RBP16.03■□□□□ 0.16
MRPL55-230ENST00000489430 CENPMQ9NSP4 180 aa16.03■□□□□ 0.16
MRPL55-230ENST00000489430 DNHD1Q96M86 4753 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms