RNA–Protein interactions for RNA: ENST00000489343.5

NPHP3-AS1-201, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,957 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-201ENST00000489343 GPN3Q9UHW5 284 aaPredicted RBP13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 OTOGLQ3ZCN5 2332 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 NPIPB7O75200 414 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 TGM6O95932 706 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 CD1AP06126 327 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 GUSBP08236 651 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 ACAA1P09110 424 aaPredicted RBP13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 CCL3P10147 92 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 APEHP13798 732 aaKnown RBP13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 BTF3P20290 206 aaKnown RBP13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 RASGEF1BQ0VAM2 473 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 NKPD1Q17RQ9 610 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 SCGB2B2Q4G0G5 96 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 C5orf46Q6UWT4 87 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 MICU1Q9BPX6 476 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 GPN1Q9HCN4 374 aaPredicted RBP13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 PIPOXQ9P0Z9 390 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 PISDQ9UG56 409 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 LRP12Q9Y561 859 aa13.82□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 XRCC3O43542 346 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 ZFAND5O76080 213 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 NDUFB6O95139 128 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 PTGDSP41222 190 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 BIDP55957 195 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 FGL1Q08830 312 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 MYBPHQ13203 477 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 SGCBQ16585 318 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 TMEM176BQ3YBM2 270 aaPredicted RBP13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 ASPHD2Q6ICH7 369 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 AGBL5Q8NDL9 886 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 RPS4Y2Q8TD47 263 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 MFRPQ9BY79 579 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 A0A0G2JMM0 328 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 A0A1W2PPB8 328 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 A0A1W2PPC1 479 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 A0A1W2PRS3 328 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 UBE2QL1A1L167 161 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 NAP1L6A6NFF2 107 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 VSTM2BA6NLU5 285 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 KIR3DP1A8MWS1 328 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 KLF7O75840 302 aaPredicted RBP13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 KLK3P07288 261 aaPredicted RBP13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 SLC2A1P11166 492 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 PRSS3P35030 304 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 DNASE1L1P49184 302 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 RAG2P55895 527 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 EGR3Q06889 387 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 C17orf67Q0P5P2 114 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 IKZF1Q13422 519 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 DCAF12L2Q5VW00 463 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 MRPL14Q6P1L8 145 aaKnown RBP13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 ZNF679Q8IYX0 411 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 OR1J4Q8NGS1 313 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 POC1BQ8TC44 478 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 SEC61A2Q9H9S3 476 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 HS3ST3B1Q9Y662 390 aa13.81□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 TMEM272A0A1B0GTI8 110 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 A0A1W2PQD3 144 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 ZNHIT1O43257 154 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 PRAF2O60831 178 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 TXNDC12O95881 172 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 RIDAP52758 137 aaKnown RBP13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 PCOLCEQ15113 449 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 DCXRQ7Z4W1 244 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 CBLN2Q8IUK8 224 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 CARFQ8N187 725 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 MUC20Q8N307 709 aaPredicted RBP13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 ACBD4Q8NC06 268 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 RELL2Q8NC24 303 aaPredicted RBP13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 NPDC1Q9NQX5 325 aaPredicted RBP13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 AKAP13Q12802 2813 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 CUL9Q8IWT3 2517 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 TRBV5-7A0A0A0MS05 114 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 LNP1A1A4G5 178 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 NPIPA5E9PKD4 350 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 PTAFRP25105 342 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 GNALP38405 381 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 ZNF41P51814 821 aaPredicted RBP13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 CAPZA1P52907 286 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 H2BFSP57053 126 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 ZNF124Q15973 351 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 Q3ZCU0 254 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 LRRC37A5PQ49AS3 106 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 EMC4Q5J8M3 183 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 PABPC1L2AQ5JQF8 200 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 WDSUB1Q8N9V3 476 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 OR13C3Q8NGS6 347 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 CYYR1Q96J86 154 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 NKX6-2Q9C056 277 aaPredicted RBP13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 BIN3Q9NQY0 253 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 NPIPA1Q9UND3 350 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 ETV7Q9Y603 341 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 NCKAP5O14513 1909 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 OR6C76A6NM76 312 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 FTCDNL1E5RQL4 147 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 H7C417 338 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 P2RY10O00398 339 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 ABCD4O14678 606 aa13.8□□□□□ -0.2
NPHP3-AS1-201ENST00000489343 ZNF823P16415 610 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms