RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 POLR2J3Q9H1A7 115 aaKnown RBP13.27□□□□□ -0.29
USP48-210ENST00000489108 RERGLQ9H628 205 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 KAT8Q9H7Z6 458 aaKnown RBP13.27□□□□□ -0.29
USP48-210ENST00000489108 FN3KRPQ9HA64 309 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 DNAJB11Q9UBS4 358 aa13.27□□□□□ -0.29
USP48-210ENST00000489108 RPUSD1Q9UJJ7 312 aaKnown RBP13.27□□□□□ -0.29
USP48-210ENST00000489108 COA3Q9Y2R0 106 aaPredicted RBP13.27□□□□□ -0.29
USP48-210ENST00000489108 TEX13CA0A0J9YWL9 993 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 OOEPA6NGQ2 149 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 POLR3GO15318 223 aaPredicted RBP13.26□□□□□ -0.29
USP48-210ENST00000489108 OR1E2P47887 323 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 IDH3AP50213 366 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 DLX1P56177 255 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 LSM6P62312 80 aaKnown RBP13.26□□□□□ -0.29
USP48-210ENST00000489108 GK2Q14410 553 aaPredicted RBP13.26□□□□□ -0.29
USP48-210ENST00000489108 RSPO1Q2MKA7 263 aaPredicted RBP13.26□□□□□ -0.29
USP48-210ENST00000489108 FOXB2Q5VYV0 432 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 CCBE1Q6UXH8 406 aaPredicted RBP13.26□□□□□ -0.29
USP48-210ENST00000489108 CCDC80Q76M96 950 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 DHDDSQ86SQ9 333 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 KLHDC1Q8N7A1 406 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 OR10A6Q8NH74 314 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 OR5R1Q8NH85 324 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 ST8SIA4Q92187 359 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 Q96M85 177 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 CGREF1Q99674 301 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 EBF4Q9BQW3 602 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 SIRT7Q9NRC8 400 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 ONECUT1Q9UBC0 465 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 GRHPRQ9UBQ7 328 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 ATPIF1Q9UII2 106 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 ADAM18Q9Y3Q7 739 aa13.26□□□□□ -0.29
USP48-210ENST00000489108 PRSS37A4D1T9 235 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 NPFFO15130 113 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 EEF1B2P24534 225 aaKnown RBP13.25□□□□□ -0.29
USP48-210ENST00000489108 OR8G1Q15617 311 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 C11orf91Q3C1V1 193 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 MESTQ5EB52 335 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 METAP1DQ6UB28 335 aaPredicted RBP13.25□□□□□ -0.29
USP48-210ENST00000489108 COLCA1Q6ZS62 124 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 OAFQ86UD1 273 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 CALHM3Q86XJ0 350 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 FAM90A1Q86YD7 464 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 GLB1L2Q8IW92 636 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 PNKDQ8N490 385 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 MREGQ8N565 214 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 SPERTQ8NA61 448 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 MMP28Q9H239 520 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 TRIM36Q9NQ86 728 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 DNAH9Q9NYC9 4486 aa13.25□□□□□ -0.29
USP48-210ENST00000489108 IGHV3OR15-7A0A075B7D8 119 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 HTR3EA5X5Y0 456 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 XKRYO14609 159 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 IMPA2O14732 288 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 SLC16A7O60669 478 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 KHDRBS3O75525 346 aaKnown RBP13.24□□□□□ -0.29
USP48-210ENST00000489108 PAHP00439 452 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 VSIG10L2P0DP72 767 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 CA6P23280 308 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 RPL4P36578 427 aaKnown RBP13.24□□□□□ -0.29
USP48-210ENST00000489108 GZMMP51124 257 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 GUCA2AQ02747 115 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 KLRD1Q13241 179 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 VMACQ2NL98 169 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 C11orf88Q6PI97 169 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 ZNF826PQ6ZT77 177 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 NAA40Q86UY6 237 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 LY6G5BQ8NDX9 201 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 OR4S1Q8NGB4 309 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 OR13C2Q8NGS9 318 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 SPRYD4Q8WW59 207 aaPredicted RBP13.24□□□□□ -0.29
USP48-210ENST00000489108 SLCO4A1Q96BD0 722 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 COQ7Q99807 217 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 C1orf123Q9NWV4 160 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 BAG5Q9UL15 447 aa13.24□□□□□ -0.29
USP48-210ENST00000489108 A0A1B0GW55 424 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 MEIOCA2RUB1 952 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 EFCAB9A8MZ26 197 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 H3BUX3 64 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 K7EIL1 84 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 AHCYL1O43865 530 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 CD14P08571 375 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 DUX4L2P0CJ85 424 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 DUX4L3P0CJ86 424 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 DUX4L4P0CJ87 422 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 DUX4L5P0CJ88 424 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 DUX4L6P0CJ89 424 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 DUX4L7P0CJ90 424 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 HIST1H3AP68431 136 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 ELF3P78545 371 aaPredicted RBP13.23□□□□□ -0.29
USP48-210ENST00000489108 EMX1Q04741 257 aaPredicted RBP13.23□□□□□ -0.29
USP48-210ENST00000489108 ST3GAL3Q11203 375 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 LY6EQ16553 131 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 ANKDD1AQ495B1 522 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 HIST2H3PS2Q5TEC6 136 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 CORO6Q6QEF8 472 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 DUX4L9Q6RFH8 374 aaPredicted RBP13.23□□□□□ -0.29
USP48-210ENST00000489108 HIST2H3AQ71DI3 136 aa13.23□□□□□ -0.29
USP48-210ENST00000489108 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.23□□□□□ -0.29
USP48-210ENST00000489108 NRMQ8IXM6 262 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms