RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 M0R135 149 aa21.08■□□□□ 0.97
HMGN1-217ENST00000489072 GNGT2O14610 69 aa21.08■□□□□ 0.97
HMGN1-217ENST00000489072 MLNRO43193 412 aa21.08■□□□□ 0.97
HMGN1-217ENST00000489072 DNAJC8O75937 253 aaPredicted RBP21.08■□□□□ 0.97
HMGN1-217ENST00000489072 IFNGP01579 166 aa21.08■□□□□ 0.97
HMGN1-217ENST00000489072 SRP14P37108 136 aaKnown RBP21.08■□□□□ 0.97
HMGN1-217ENST00000489072 ENTPD1P49961 510 aa21.08■□□□□ 0.97
HMGN1-217ENST00000489072 TPTEP56180 551 aa21.08■□□□□ 0.97
HMGN1-217ENST00000489072 SRSF2Q01130 221 aaKnown RBP21.08■□□□□ 0.97
HMGN1-217ENST00000489072 LINC01590Q5TEZ4 76 aa21.08■□□□□ 0.97
HMGN1-217ENST00000489072 OR13G1Q8NGZ3 307 aa21.08■□□□□ 0.97
HMGN1-217ENST00000489072 ZNF799Q96GE5 643 aa21.08■□□□□ 0.97
HMGN1-217ENST00000489072 SIGLEC11Q96RL6 698 aa21.08■□□□□ 0.97
HMGN1-217ENST00000489072 G6PC2Q9NQR9 355 aa21.08■□□□□ 0.97
HMGN1-217ENST00000489072 PPP1R3CQ9UQK1 317 aa21.08■□□□□ 0.97
HMGN1-217ENST00000489072 C5orf63A6NC05 138 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 FAM183AA6NL82 134 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 H3BN98 237 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 SURF4O15260 269 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 FKBP6O75344 327 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 SPARCP09486 303 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 ANPEPP15144 967 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 ZNF3P17036 446 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 OTX1P32242 354 aaPredicted RBP21.07■□□□□ 0.96
HMGN1-217ENST00000489072 GRK5P34947 590 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 PEG10Q86TG7 708 aaKnown RBP21.07■□□□□ 0.96
HMGN1-217ENST00000489072 PHC2Q8IXK0 858 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 OR6K6Q8NGW6 343 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 SPTSSAQ969W0 71 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 SLCO4A1Q96BD0 722 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 MEGF10Q96KG7 1140 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 CADM1Q9BY67 442 aaKnown RBP21.07■□□□□ 0.96
HMGN1-217ENST00000489072 GCM1Q9NP62 436 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 UBAP1Q9NZ09 502 aa21.07■□□□□ 0.96
HMGN1-217ENST00000489072 A0A1B0GWJ7 208 aa21.06■□□□□ 0.96
HMGN1-217ENST00000489072 ZNF593O00488 134 aaPredicted RBP21.06■□□□□ 0.96
HMGN1-217ENST00000489072 HOXB6P17509 224 aaKnown RBP21.06■□□□□ 0.96
HMGN1-217ENST00000489072 CBX1P83916 185 aa21.06■□□□□ 0.96
HMGN1-217ENST00000489072 SNAI3Q3KNW1 292 aa21.06■□□□□ 0.96
HMGN1-217ENST00000489072 TEX30Q5JUR7 227 aa21.06■□□□□ 0.96
HMGN1-217ENST00000489072 SLC27A4Q6P1M0 643 aa21.06■□□□□ 0.96
HMGN1-217ENST00000489072 PAPD5Q8NDF8 572 aaKnown RBP21.06■□□□□ 0.96
HMGN1-217ENST00000489072 SPATA3Q8NHX4 192 aa21.06■□□□□ 0.96
HMGN1-217ENST00000489072 ST7LQ8TDW4 575 aa21.06■□□□□ 0.96
HMGN1-217ENST00000489072 TMEM158Q8WZ71 300 aa21.06■□□□□ 0.96
HMGN1-217ENST00000489072 GSC2O15499 205 aa21.05■□□□□ 0.96
HMGN1-217ENST00000489072 SBK2P0C263 348 aa21.05■□□□□ 0.96
HMGN1-217ENST00000489072 SELEP16581 610 aa21.05■□□□□ 0.96
HMGN1-217ENST00000489072 PRKACGP22612 351 aa21.05■□□□□ 0.96
HMGN1-217ENST00000489072 POU1F1P28069 291 aa21.05■□□□□ 0.96
HMGN1-217ENST00000489072 SLC6A9P48067 706 aa21.05■□□□□ 0.96
HMGN1-217ENST00000489072 MMP16P51512 607 aa21.05■□□□□ 0.96
HMGN1-217ENST00000489072 BNIP1Q12981 228 aa21.05■□□□□ 0.96
HMGN1-217ENST00000489072 MALLQ13021 153 aa21.05■□□□□ 0.96
HMGN1-217ENST00000489072 ZMYND11Q15326 602 aa21.05■□□□□ 0.96
HMGN1-217ENST00000489072 FAHD2BQ6P2I3 314 aaPredicted RBP21.05■□□□□ 0.96
HMGN1-217ENST00000489072 SLAMF6Q96DU3 332 aa21.05■□□□□ 0.96
HMGN1-217ENST00000489072 FAHD2AQ96GK7 314 aa21.05■□□□□ 0.96
HMGN1-217ENST00000489072 IGHV3-64DA0A0J9YX35 117 aa21.04■□□□□ 0.96
HMGN1-217ENST00000489072 F5H5P2 479 aa21.04■□□□□ 0.96
HMGN1-217ENST00000489072 E2F6O75461 281 aa21.04■□□□□ 0.96
HMGN1-217ENST00000489072 AVPP01185 164 aa21.04■□□□□ 0.96
HMGN1-217ENST00000489072 HLA-DPB1P04440 258 aa21.04■□□□□ 0.96
HMGN1-217ENST00000489072 GINS1Q14691 196 aa21.04■□□□□ 0.96
HMGN1-217ENST00000489072 KRTAP24-1Q3LI83 254 aa21.04■□□□□ 0.96
HMGN1-217ENST00000489072 C1orf229Q6ZS94 237 aaPredicted RBP21.04■□□□□ 0.96
HMGN1-217ENST00000489072 ZNF420Q8TAQ5 688 aaPredicted RBP21.04■□□□□ 0.96
HMGN1-217ENST00000489072 COPS4Q9BT78 406 aa21.04■□□□□ 0.96
HMGN1-217ENST00000489072 CENPMQ9NSP4 180 aa21.04■□□□□ 0.96
HMGN1-217ENST00000489072 TMEM100Q9NV29 134 aa21.04■□□□□ 0.96
HMGN1-217ENST00000489072 DNAJB9Q9UBS3 223 aa21.04■□□□□ 0.96
HMGN1-217ENST00000489072 TMEM178BH3BS89 294 aa21.03■□□□□ 0.96
HMGN1-217ENST00000489072 PNPP00491 289 aa21.03■□□□□ 0.96
HMGN1-217ENST00000489072 PRKXP51817 358 aa21.03■□□□□ 0.96
HMGN1-217ENST00000489072 BTG1P62324 171 aa21.03■□□□□ 0.96
HMGN1-217ENST00000489072 ZNF92Q03936 586 aa21.03■□□□□ 0.96
HMGN1-217ENST00000489072 DRAM2Q6UX65 266 aa21.03■□□□□ 0.96
HMGN1-217ENST00000489072 PGAP1Q75T13 922 aa21.03■□□□□ 0.96
HMGN1-217ENST00000489072 SPATC1Q76KD6 591 aa21.03■□□□□ 0.96
HMGN1-217ENST00000489072 LRRC28Q86X40 367 aaPredicted RBP21.03■□□□□ 0.96
HMGN1-217ENST00000489072 OR2AE1Q8NHA4 323 aa21.03■□□□□ 0.96
HMGN1-217ENST00000489072 OTULINQ96BN8 352 aa21.03■□□□□ 0.96
HMGN1-217ENST00000489072 YY1AP1Q9H869 796 aa21.03■□□□□ 0.96
HMGN1-217ENST00000489072 NTN4Q9HB63 628 aa21.03■□□□□ 0.96
HMGN1-217ENST00000489072 SLC2A1P11166 492 aa21.02■□□□□ 0.96
HMGN1-217ENST00000489072 OSMP13725 252 aa21.02■□□□□ 0.96
HMGN1-217ENST00000489072 SRP9P49458 86 aaKnown RBP21.02■□□□□ 0.96
HMGN1-217ENST00000489072 BLVRAP53004 296 aa21.02■□□□□ 0.96
HMGN1-217ENST00000489072 LCN2P80188 198 aa21.02■□□□□ 0.96
HMGN1-217ENST00000489072 TMEM155Q4W5P6 130 aa21.02■□□□□ 0.96
HMGN1-217ENST00000489072 GLYATL3Q5SZD4 288 aa21.02■□□□□ 0.96
HMGN1-217ENST00000489072 MRPL21Q7Z2W9 205 aaKnown RBP21.02■□□□□ 0.96
HMGN1-217ENST00000489072 KCNJ15Q99712 375 aa21.02■□□□□ 0.96
HMGN1-217ENST00000489072 TMPRSS13Q9BYE2 586 aa21.02■□□□□ 0.96
HMGN1-217ENST00000489072 METTL17Q9H7H0 456 aaPredicted RBP21.02■□□□□ 0.96
HMGN1-217ENST00000489072 MARCH7Q9H992 704 aa21.02■□□□□ 0.96
HMGN1-217ENST00000489072 ZNF878C9JN71 531 aa21.01■□□□□ 0.95
HMGN1-217ENST00000489072 GLCEO94923 617 aa21.01■□□□□ 0.95
HMGN1-217ENST00000489072 ZFP36P26651 326 aaKnown RBP21.01■□□□□ 0.95
HMGN1-217ENST00000489072 GSTT1P30711 240 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms