RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SPRNQ5BIV9 151 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 DCAF12L2Q5VW00 463 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 MUC20Q8N307 709 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 SLC37A3Q8NCC5 494 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 OR10G2Q8NGC3 310 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 OR8D4Q8NGM9 314 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 TEX47Q8TBZ9 253 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 ZNF799Q96GE5 643 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 SLC30A2Q9BRI3 323 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 PNRC2Q9NPJ4 139 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 NOP16Q9Y3C1 178 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 COMMD3-BMI1R4GMX3 469 aa11.66□□□□□ -0.54
SPTLC1-207ENST00000488921 A0A0A6YYJ9 748 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 ARRDC5A6NEK1 342 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 RIIAD1A6NNX1 92 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 ANKRD65E5RJM6 399 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 SOX14O95416 240 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 CST1P01037 141 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 LCATP04180 440 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 SBK2P0C263 348 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 FMO3P31513 532 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 MDH2P40926 338 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 SLC6A9P48067 706 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 MMP16P51512 607 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 SLC25A1P53007 311 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 CRMP1Q14194 572 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 BHLHE23Q8NDY6 225 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 OR10AD1Q8NGE0 317 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 UTP4Q969X6 686 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 MAP6Q96JE9 813 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 MEGF10Q96KG7 1140 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 DDOQ99489 341 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 C19orf24Q9BVV8 132 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 RBM4Q9BWF3 364 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 OCEL1Q9H607 264 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 YY1AP1Q9H869 796 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 GCM1Q9NP62 436 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 DDX28Q9NUL7 540 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 ARMC1Q9NVT9 282 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 VNN3Q9NY84 501 aa11.65□□□□□ -0.54
SPTLC1-207ENST00000488921 PPIAL4EA0A075B759 164 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 PPIAL4CA0A0B4J2A2 164 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 DHRS12A0PJE2 317 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 LRRC30A6NM36 301 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 PPIAL4DF5H284 164 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 GNGT2O14610 69 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 PPIAL4FP0DN26 164 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 ENTPD1P49961 510 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 RAD23AP54725 363 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 DBPQ10586 325 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 GK2Q14410 553 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 RSPO1Q2MKA7 263 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 DRAM2Q6UX65 266 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 CD300LDQ6UXZ3 194 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 PGAP1Q75T13 922 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 MRPL21Q7Z2W9 205 aaKnown RBP11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 C1QL2Q7Z5L3 287 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 C1orf87Q8N0U7 546 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 OR9Q1Q8NGQ5 310 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 OR6K6Q8NGW6 343 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 ZNF418Q8TF45 676 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 GIPC3Q8TF64 312 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 SIGLEC11Q96RL6 698 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 TMPRSS13Q9BYE2 586 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 SLC22A4Q9H015 551 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 OPA3Q9H6K4 179 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 WDR76Q9H967 626 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 PATZ1Q9HBE1 687 aaKnown RBP11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 CMC2Q9NRP2 79 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 TMEM100Q9NV29 134 aa11.64□□□□□ -0.55
SPTLC1-207ENST00000488921 A0A1B0GWJ7 208 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 TVP23AA6NH52 213 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 ZNF878C9JN71 531 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 H0YHG0 523 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 H3BN98 237 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 TMEM178BH3BS89 294 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 MLNRO43193 412 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 SPARCP09486 303 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 SPI1P17947 270 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 CPT2P23786 658 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 OTX1P32242 354 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 LCN2P80188 198 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 KPNB1Q14974 876 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 TAF13Q15543 124 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 ZNF181Q2M3W8 571 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 TEX30Q5JUR7 227 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 ZNF362Q5T0B9 420 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 DCXRQ7Z4W1 244 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 LRRC28Q86X40 367 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 ADGRG5Q8IZF4 528 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 CELF2-AS1Q8N7Q2 184 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 OR51L1Q8NGJ5 315 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 OR4Q3Q8NH05 313 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 SPRYD4Q8WW59 207 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 STMN2Q93045 179 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 ERGIC1Q969X5 290 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 COPS4Q9BT78 406 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 CHID1Q9BWS9 393 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 NMNAT2Q9BZQ4 307 aa11.63□□□□□ -0.55
SPTLC1-207ENST00000488921 DCAF16Q9NXF7 216 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms