RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 COX5AP20674 150 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 CSNK1A1P48729 337 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 LCN6P62502 163 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 TSC22D1Q15714 1073 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 HIST3H3Q16695 136 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 C9orf135Q5VTT2 229 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 FAM205BPQ63HN1 556 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 GPR137CQ8N3F9 429 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 ZNF511Q8NB15 262 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 OR4M1Q8NGD0 313 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 TRMT10AQ8TBZ6 339 aaKnown RBP16.95■□□□□ 0.3
CCM2-216ENST00000488727 CRLF2Q9HC73 371 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 RBFOX1Q9NWB1 397 aaKnown RBP16.95■□□□□ 0.3
CCM2-216ENST00000488727 GLTPQ9NZD2 209 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 ZNF281Q9Y2X9 895 aa16.95■□□□□ 0.3
CCM2-216ENST00000488727 KLF2Q9Y5W3 355 aaPredicted RBP16.95■□□□□ 0.3
CCM2-216ENST00000488727 MEIOCA2RUB1 952 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 A6NIZ1 184 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 ZNF879B4DU55 563 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 LYZL6O75951 148 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 KIR2DL3P43628 341 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 CLRN1P58418 232 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 RAP1BP61224 184 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 RAP1AP62834 184 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 SNTB1Q13884 538 aaKnown RBP16.94■□□□□ 0.3
CCM2-216ENST00000488727 P2RY6Q15077 328 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 YIF1BQ5BJH7 314 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 CEP78Q5JTW2 689 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 LRFN4Q6PJG9 635 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 FAM220AQ7Z4H9 259 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 SAMD12Q8N8I0 201 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 DUSP18Q8NEJ0 188 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 ENKURQ8TC29 256 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 TSSK2Q96PF2 358 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 GPR35Q9HC97 309 aa16.94■□□□□ 0.3
CCM2-216ENST00000488727 PAIP2BQ9ULR5 123 aaKnown RBP16.94■□□□□ 0.3
CCM2-216ENST00000488727 ZNF587BE7ETH6 402 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 RPL36A-HNRNPH2H7BZ11 118 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 PHYHO14832 338 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 ARHGEF9O43307 516 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 ABHD16AO95870 558 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 FAM157BP0CG42 384 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 EPXP11678 715 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 PSMB10P40306 273 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 FMODQ06828 376 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 HSD17B12Q53GQ0 312 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 SFRP5Q5T4F7 317 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 HACD4Q5VWC8 232 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 ZNF433Q8N7K0 673 aaPredicted RBP16.93■□□□□ 0.3
CCM2-216ENST00000488727 CMTM3Q96MX0 182 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 ULBP2Q9BZM5 246 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 MMP28Q9H239 520 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 RNF121Q9H920 327 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 IGKV1D-43A0A0B4J1Z2 117 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 A0A0G2JMP0 313 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 A0A0X1KG70 313 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 HMX3A6NHT5 357 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 FAM171A2A8MVW0 826 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 CENPBD1B2RD01 187 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 DCTN6O00399 190 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 XKRYO14609 159 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 LYRM1O43325 122 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 CCNKO75909 580 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 PSMB1P20618 241 aaKnown RBP16.93■□□□□ 0.3
CCM2-216ENST00000488727 MPGP29372 298 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 MADCAM1Q13477 382 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 CEACAM16Q2WEN9 425 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 PYHIN1Q6K0P9 492 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 OR6V1Q8N148 313 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 OR4M2Q8NGB6 313 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 MCHR2Q969V1 340 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 LRRC46Q96FV0 321 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 PSMG3-AS1Q96PY0 264 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 OR14A2Q96R54 314 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 PDCD1LG2Q9BQ51 273 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 WDR76Q9H967 626 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 MRM2Q9UI43 246 aaKnown RBP16.93■□□□□ 0.3
CCM2-216ENST00000488727 KLHDC2Q9Y2U9 406 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 FKBP7Q9Y680 259 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 TMEM14AQ9Y6G1 99 aa16.93■□□□□ 0.3
CCM2-216ENST00000488727 PRSS37A4D1T9 235 aa16.92■□□□□ 0.3
CCM2-216ENST00000488727 PRSS44E7EML9 344 aa16.92■□□□□ 0.3
CCM2-216ENST00000488727 C16orf97H3BN30 126 aa16.92■□□□□ 0.3
CCM2-216ENST00000488727 PDCD5O14737 125 aa16.92■□□□□ 0.3
CCM2-216ENST00000488727 QDPRP09417 244 aa16.92■□□□□ 0.3
CCM2-216ENST00000488727 ATF1P18846 271 aa16.92■□□□□ 0.3
CCM2-216ENST00000488727 NR4A2P43354 598 aa16.92■□□□□ 0.3
CCM2-216ENST00000488727 PITPNBP48739 271 aa16.92■□□□□ 0.3
CCM2-216ENST00000488727 CENPAP49450 140 aa16.92■□□□□ 0.3
CCM2-216ENST00000488727 NANOS3P60323 173 aaKnown RBP16.92■□□□□ 0.3
CCM2-216ENST00000488727 EGR3Q06889 387 aa16.92■□□□□ 0.3
CCM2-216ENST00000488727 ABHD12BQ7Z5M8 362 aaPredicted RBP16.92■□□□□ 0.3
CCM2-216ENST00000488727 OR6F1Q8NGZ6 308 aa16.92■□□□□ 0.3
CCM2-216ENST00000488727 TRIM63Q969Q1 353 aa16.92■□□□□ 0.3
CCM2-216ENST00000488727 SRA1Q9HD15 236 aaKnown RBP16.92■□□□□ 0.3
CCM2-216ENST00000488727 SLC22A23A1A5C7 686 aa16.91■□□□□ 0.3
CCM2-216ENST00000488727 RAD51DO75771 328 aa16.91■□□□□ 0.3
CCM2-216ENST00000488727 IGFBP2P18065 325 aa16.91■□□□□ 0.3
CCM2-216ENST00000488727 DDOSTP39656 456 aa16.91■□□□□ 0.3
CCM2-216ENST00000488727 ZNF133P52736 654 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms