RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 OTX1P32242 354 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-207ENST00000488591 POLR2IP36954 125 aaKnown RBP12.84□□□□□ -0.35
CXCL12-207ENST00000488591 NR4A2P43354 598 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 MAGEB1P43366 347 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 EFNB1P98172 346 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 HLXQ14774 488 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-207ENST00000488591 FAM209AQ5JX71 171 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 ZBTB49Q6ZSB9 765 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 GID4Q8IVV7 300 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 RNF133Q8WVZ7 376 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 ZNF582Q96NG8 517 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-207ENST00000488591 MSL2Q9HCI7 577 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 IMPAD1Q9NX62 359 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 TMEM14AQ9Y6G1 99 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 M0R129 80 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 IGHV1-46P01743 117 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 ACHEP22303 614 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 USF1P22415 310 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-207ENST00000488591 GIFP27352 417 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 CX3CR1P49238 355 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 LOXL1Q08397 574 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-207ENST00000488591 ZIK1Q3SY52 487 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-207ENST00000488591 AADACL4Q5VUY2 407 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 OR2T2Q6IF00 324 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 PGAP1Q75T13 922 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 MRPL21Q7Z2W9 205 aaKnown RBP12.83□□□□□ -0.36
CXCL12-207ENST00000488591 MAPK1IP1LQ8NDC0 245 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 OR8J1Q8NGP2 316 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 TRUB1Q8WWH5 349 aaKnown RBP12.83□□□□□ -0.36
CXCL12-207ENST00000488591 GTF3AQ92664 365 aaKnown RBP12.83□□□□□ -0.36
CXCL12-207ENST00000488591 CNN2Q99439 309 aaKnown RBP12.83□□□□□ -0.36
CXCL12-207ENST00000488591 GSX1Q9H4S2 264 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-207ENST00000488591 CHODLQ9H9P2 273 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 SAP30LQ9HAJ7 183 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 N6AMT1Q9Y5N5 214 aa12.83□□□□□ -0.36
CXCL12-207ENST00000488591 IGHV1-69-2A0A0G2JMI3 117 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 CCDC182A6NF36 153 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 ZSCAN5BA6NJL1 495 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 VWC2LB2RUY7 222 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 LYNX1G3V0Z9 82 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 ANXA2P07355 339 aaKnown RBP12.82□□□□□ -0.36
CXCL12-207ENST00000488591 ADH4P08319 380 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 MRPL3P09001 348 aaKnown RBP12.82□□□□□ -0.36
CXCL12-207ENST00000488591 LYNX1P0DP58 116 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 COL8A2P25067 703 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 OPRL1P41146 370 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 TMEM33P57088 247 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 CDK5R2Q13319 367 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 GGTLC2Q14390 218 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 GK2Q14410 553 aaPredicted RBP12.82□□□□□ -0.36
CXCL12-207ENST00000488591 TMEM255AQ5JRV8 349 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 KCTD18Q6PI47 426 aaPredicted RBP12.82□□□□□ -0.36
CXCL12-207ENST00000488591 BCDIN3DQ7Z5W3 292 aaKnown RBP12.82□□□□□ -0.36
CXCL12-207ENST00000488591 KRT77Q7Z794 578 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 OR5AS1Q8N127 324 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 OR8G5Q8NG78 346 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 OR2Z1Q8NG97 314 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 OR13G1Q8NGZ3 307 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 ASB17Q8WXJ9 295 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 RFKQ969G6 155 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 HRASLS5Q96KN8 279 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 SMR3AQ99954 134 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 NIPAL2Q9H841 368 aa12.82□□□□□ -0.36
CXCL12-207ENST00000488591 WARS2Q9UGM6 360 aaKnown RBP12.82□□□□□ -0.36
CXCL12-207ENST00000488591 CHD3Q12873 2000 aaKnown RBP12.82□□□□□ -0.36
CXCL12-207ENST00000488591 IQCF6A8MYZ5 107 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 TBX1O43435 398 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 XRCC2O43543 280 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 CDC14BO60729 498 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 NCR1O76036 304 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 LY6G6DO95868 133 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 HEXAP06865 529 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 SLC2A1P11166 492 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 ALOX5APP20292 161 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 CRYBB2P43320 205 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 GPR6P46095 362 aaPredicted RBP12.81□□□□□ -0.36
CXCL12-207ENST00000488591 TNFAIP6P98066 277 aaPredicted RBP12.81□□□□□ -0.36
CXCL12-207ENST00000488591 RIN1Q13671 783 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 HFEQ30201 348 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 USP51Q70EK9 711 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 OR52H1Q8NGJ2 320 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 FAM81AQ8TBF8 368 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 SPRYD4Q8WW59 207 aaPredicted RBP12.81□□□□□ -0.36
CXCL12-207ENST00000488591 ELMOD3Q96FG2 381 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 AMELYQ99218 206 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 MNTQ99583 582 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 MROQ9BYG7 248 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 BPESC1Q9GZL8 116 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 OPA3Q9H6K4 179 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 TMEM100Q9NV29 134 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 HAO2Q9NYQ3 351 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 DNAJC27Q9NZQ0 273 aa12.81□□□□□ -0.36
CXCL12-207ENST00000488591 GGT3PA6NGU5 568 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 ANKRD65E5RJM6 399 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 PHYHO14832 338 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 CD55P08174 381 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 TNFRSF1AP19438 455 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 HTR1FP30939 366 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 ATP6V1E1P36543 226 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 HCCSP53701 268 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms