RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 HS3ST1O14792 307 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 XPNPEP2O43895 674 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 CCDC159P0C7I6 412 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 ACSM4P0C7M7 580 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 PIPP12273 146 aaPredicted RBP8.88□□□□□ -0.99
SKA1-204ENST00000488454 TUBG1P23258 451 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 EEF1B2P24534 225 aaKnown RBP8.88□□□□□ -0.99
SKA1-204ENST00000488454 GCH1P30793 250 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 APOBEC3AP31941 199 aaPredicted RBP8.88□□□□□ -0.99
SKA1-204ENST00000488454 DCTDP32321 178 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 GLRXP35754 106 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 CX3CR1P49238 355 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 PPP1CBP62140 327 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 ACTA2P62736 377 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 ACTG2P63267 376 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 ST3GAL4Q11206 333 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 MALLQ13021 153 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 GALEQ14376 348 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 RSPO1Q2MKA7 263 aaPredicted RBP8.88□□□□□ -0.99
SKA1-204ENST00000488454 ZNF829Q3KNS6 432 aaPredicted RBP8.88□□□□□ -0.99
SKA1-204ENST00000488454 RBM48Q5RL73 367 aaKnown RBP8.88□□□□□ -0.99
SKA1-204ENST00000488454 LAIR2Q6ISS4 152 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 RGS7BPQ6MZT1 257 aaPredicted RBP8.88□□□□□ -0.99
SKA1-204ENST00000488454 ZNF544Q6NX49 715 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 TMPRSS11AQ6ZMR5 421 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 LHFPL3Q86UP9 236 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 EGFL6Q8IUX8 553 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 FBXL14Q8N1E6 418 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 FBXW5Q969U6 566 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 APOBEC3DQ96AK3 386 aaPredicted RBP8.88□□□□□ -0.99
SKA1-204ENST00000488454 DHRS9Q9BPW9 319 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 ALG8Q9BVK2 526 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 TTTY10Q9BZA0 68 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 UBTD1Q9HAC8 227 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 TUBG2Q9NRH3 451 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 CA10Q9NS85 328 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 DIMT1Q9UNQ2 313 aaKnown RBP8.88□□□□□ -0.99
SKA1-204ENST00000488454 MYRFQ9Y2G1 1151 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 EXOSC1Q9Y3B2 195 aaKnown RBP8.88□□□□□ -0.99
SKA1-204ENST00000488454 CMAHPQ9Y471 501 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 LRRC42Q9Y546 428 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 LRP12Q9Y561 859 aa8.88□□□□□ -0.99
SKA1-204ENST00000488454 ANKHD1Q8IWZ3 2542 aaKnown RBP8.88□□□□□ -0.99
SKA1-204ENST00000488454 USP9YO00507 2555 aaPredicted RBP8.87□□□□□ -0.99
SKA1-204ENST00000488454 TMEM269A0A1B0GVZ9 245 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 A6NHS1 94 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 ACOD1A6NK06 481 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 E7EQL1 145 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 J3QLW9 94 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 SMPD2O60906 423 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 RPP14O95059 124 aaKnown RBP8.87□□□□□ -0.99
SKA1-204ENST00000488454 ATE1O95260 518 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 NGFP01138 241 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 ZNF19P17023 458 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 THBS4P35443 961 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 SERPINF1P36955 418 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 WNT5AP41221 380 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 ZNF121P58317 390 aaPredicted RBP8.87□□□□□ -0.99
SKA1-204ENST00000488454 ZNF85Q03923 595 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 MOGQ16653 247 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 KRTAP27-1Q3LI81 207 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 ZNF718Q3SXZ3 478 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 AGAP6Q5VW22 663 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 AHSA2Q719I0 299 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 SSX6Q7RTT6 188 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 NAA40Q86UY6 237 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 OR52H1Q8NGJ2 320 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 NEUROG1Q92886 237 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 PGAM5Q96HS1 289 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 DOK1Q99704 481 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 C1QTNF5Q9BXJ0 243 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 YTHDF1Q9BYJ9 559 aaKnown RBP8.87□□□□□ -0.99
SKA1-204ENST00000488454 CCDC90BQ9GZT6 254 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 OR10A2Q9H208 303 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 ZNF442Q9H7R0 627 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 ERVK13-1Q9NX77 482 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 DUSP13Q9UII6 198 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 GPR160Q9UJ42 338 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 GNG8Q9UK08 70 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 GTF2A1LQ9UNN4 478 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 ERGIC3Q9Y282 383 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 STARD10Q9Y365 291 aa8.87□□□□□ -0.99
SKA1-204ENST00000488454 MAGEB4O15481 346 aaPredicted RBP8.86□□□□□ -0.99
SKA1-204ENST00000488454 TBX1O43435 398 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 ICMTO60725 284 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 MT-ND5P03915 603 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 CDK1P06493 297 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 OR4A8P0C604 315 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 SLC2A1P11166 492 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 OTX1P32242 354 aaPredicted RBP8.86□□□□□ -0.99
SKA1-204ENST00000488454 GBX2P52951 348 aaPredicted RBP8.86□□□□□ -0.99
SKA1-204ENST00000488454 NKX6-1P78426 367 aaPredicted RBP8.86□□□□□ -0.99
SKA1-204ENST00000488454 TIGD6Q17RP2 521 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 TP53I3Q53FA7 332 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 SPATA46Q5T0L3 261 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 LIPNQ5VXI9 398 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 FAM57BQ71RH2 274 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 ZNF101Q8IZC7 436 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 MUC15Q8N387 334 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 KLHL36Q8N4N3 616 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms