RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 MUC15Q8N387 334 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 RFLNBQ8N5W9 214 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 OR52H1Q8NGJ2 320 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 MRPL24Q96A35 216 aaKnown RBP11.45□□□□□ -0.58
COL4A6-207ENST00000487645 TMEM80Q96HE8 168 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 DOK1Q99704 481 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 OR51B6Q9H340 312 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 FKBP14Q9NWM8 211 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 ERVK13-1Q9NX77 482 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 MRM2Q9UI43 246 aaKnown RBP11.45□□□□□ -0.58
COL4A6-207ENST00000487645 FBXO9Q9UK97 447 aaPredicted RBP11.45□□□□□ -0.58
COL4A6-207ENST00000487645 DIMT1Q9UNQ2 313 aaKnown RBP11.45□□□□□ -0.58
COL4A6-207ENST00000487645 LRRC42Q9Y546 428 aa11.45□□□□□ -0.58
COL4A6-207ENST00000487645 CHD3Q12873 2000 aaKnown RBP11.44□□□□□ -0.58
COL4A6-207ENST00000487645 TMEM269A0A1B0GVZ9 245 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 TMEM129A0AVI4 362 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 PRR32B1ATL7 298 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 B9A039 149 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 PSMD9O00233 223 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 SLC1A7O00341 560 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 XPNPEP2O43895 674 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 ZNF121P58317 390 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-207ENST00000487645 ACTA2P62736 377 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 ACTG2P63267 376 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 MALLQ13021 153 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 MED21Q13503 144 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 MOGQ16653 247 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 MST1LQ2TV78 715 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 ZNF829Q3KNS6 432 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-207ENST00000487645 CDONQ4KMG0 1287 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 RBM48Q5RL73 367 aaKnown RBP11.44□□□□□ -0.58
COL4A6-207ENST00000487645 FBXW12Q6X9E4 464 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 LHFPL3Q86UP9 236 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 YIPF7Q8N8F6 280 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 ZNF540Q8NDQ6 660 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 SYNPRQ8TBG9 265 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 SLC25A40Q8TBP6 338 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 ZNF649Q9BS31 505 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 OR2J1Q9GZK6 312 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 CBLN4Q9NTU7 201 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 EXOSC1Q9Y3B2 195 aaKnown RBP11.44□□□□□ -0.58
COL4A6-207ENST00000487645 TPRKBQ9Y3C4 175 aa11.44□□□□□ -0.58
COL4A6-207ENST00000487645 ANKRD17O75179 2603 aaKnown RBP11.43□□□□□ -0.58
COL4A6-207ENST00000487645 IGLV3-9A0A075B6K5 115 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 NBPF19A0A087WUL8 3843 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 PTGES3LE9PB15 166 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 MAGEB4O15481 346 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-207ENST00000487645 CD8AP01732 235 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 IGHV3-13P01766 116 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 ANXA2P07355 339 aaKnown RBP11.43□□□□□ -0.58
COL4A6-207ENST00000487645 LIMS3P0CW19 117 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 LIMS4P0CW20 117 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 BMP4P12644 408 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 RAC2P15153 192 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 MYL12AP19105 171 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 GCH1P30793 250 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 KLF3P57682 345 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-207ENST00000487645 PSMA6P60900 246 aaKnown RBP11.43□□□□□ -0.58
COL4A6-207ENST00000487645 ERVS71-1P61550 626 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 SWI5Q1ZZU3 235 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 LIPNQ5VXI9 398 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 SYS1Q8N2H4 156 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 STX19Q8N4C7 294 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 KLF14Q8TD94 323 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-207ENST00000487645 HAVCR2Q8TDQ0 301 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 IGFBPL1Q8WX77 278 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 MYDGFQ969H8 173 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 ITFG2Q969R8 447 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 HAVCR1Q96D42 359 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 LURAP1Q96LR2 239 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 ALG8Q9BVK2 526 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 YTHDF1Q9BYJ9 559 aaKnown RBP11.43□□□□□ -0.58
COL4A6-207ENST00000487645 TTTY10Q9BZA0 68 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 MRPL37Q9BZE1 423 aaKnown RBP11.43□□□□□ -0.58
COL4A6-207ENST00000487645 OR10A2Q9H208 303 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 PLK3Q9H4B4 646 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 DUSP21Q9H596 190 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 FAM206AQ9NX38 181 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 CHCHD3Q9NX63 227 aaKnown RBP11.43□□□□□ -0.58
COL4A6-207ENST00000487645 GPR160Q9UJ42 338 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 CAB39Q9Y376 341 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-207ENST00000487645 R4GMQ9 66 aa11.43□□□□□ -0.58
COL4A6-207ENST00000487645 PDZD2O15018 2839 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 XRCC2O43543 280 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 SRSF10O75494 262 aaKnown RBP11.42□□□□□ -0.58
COL4A6-207ENST00000487645 ATE1O95260 518 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 RAF1P04049 648 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 SOD3P08294 240 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 SLC2A1P11166 492 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 CFL1P23528 166 aaKnown RBP11.42□□□□□ -0.58
COL4A6-207ENST00000487645 CRHBPP24387 322 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 LIPAP38571 399 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 ETV1P50549 477 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 OR12D2P58182 307 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 SLC35A2P78381 396 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 MRPL28Q13084 256 aaKnown RBP11.42□□□□□ -0.58
COL4A6-207ENST00000487645 MSMPQ1L6U9 139 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 SNAI3Q3KNW1 292 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 SPATA46Q5T0L3 261 aa11.42□□□□□ -0.58
COL4A6-207ENST00000487645 RNLSQ5VYX0 342 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms